Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5255g00058 ATGGCGCCTCAAATGTTTGCTCTACCTTTAATACTTCTTGTTTTCCTTATTCCCTCCTCGTTTTCTTTCACTCCTGTGGATAATTATCTACTCAACTGTGGATCACATGCCAATGCATCACTCTTCAACCGAATCTTCACGGGCGATTCCACGAAACCCGGTTCGGATTTTCTTGCGGCGGGTAACTCTATTACGCTTGTAAACCGAAATTCACCTCCGAATTCTTCCACTTTGTATAACACGGCGAGAGTTTTCACGAGCGCGGGGAGCTACAAGTTCCATTTGAAGAGTAACGGTACCCATTTGGTACGTTTTCATTTCTCGCCTTTTTCAGCTCAAGGTTTTGATTTAAAATCCGCCAAGTTTAGTGTTCTGGTTGGTGGAAATACACTTCTGAAAGCGTTTCAGTTGCGTAATGGAACGTTGATTAAGGAGTATATACTGAAGATAGAATCAAATCTGCTCGAAATAGAGTTTGAACCTGTGGGTGATTCAGCTTTTGGGTTTGTCAATGCTCTGGAGGTATTTACAGCTCCTGTGGACTTCATTCTGGATTATGGGGCCAGGTTAGTGGGCTCTTCTGGAGTTGAAGAGTACAGCAACCTTTCAAGTCAAGTTTTAGAGACAGTTTACAGAATTAATGTTGGTGGCTCGAAAATAACTCCTTTCAATGACACCCTCTGGAGGACTTGGATTCCTGATGATGATTATTTGGTGTTTAAGGAAGCAGCTAAGCGTGTGGCGAGCACCCATACACCAAATTATCAGAACGGAAGTGCAAGCCCAGAGATCGCTCCTGATCATGTTTATATGACTGCCCAGGAGATGAATCGGGAAAACTCAAGTCTGGCTTCCAGGTTCAATATAACTTGGAAATTTCAGGTGGCTCCGGCGGGTGGTGGCGGTGTTCGGCACTTGGTTCGGTTGCATTTCTGTGATATTGTTAGCTCTGCGTTGAACTTGCTGTACTTTGATGTGTATCTTAATGGCTACTCTGCGTACAAGGATCTTGACCTCTCAACTCTTGCTGTCCATGTTCTTGCATCTCCATTCTATGTGGATTTTGTCGCAGATTCTGATGATTCAGGTTTTATTGAAATAAGTGTTGGTCCTTCTGATCTGAACAGTTTGATTCGGATGAATGCCATTTTGAATGGCGCAGAGATCATGAAGATGGTCAATGTTATGGATTCACATGTTGTCCACAAAAGAAAAACATTATGGGTATTGGTGGGCTCTCTTGTTGGAGGAGTTGTACTACTTTTGGCAGTTTTTGGTCTTCTTCTTGCTTTTATGTGCAGGAAGAGGAAACCTAGACAAAAGACAGCAGAAAGTGTAGGGTGGACACCTTTACGAATGTTTGGAGGGAGCTCACTTAGTCGACTGTCTGAAGCTCTTGCATCTCCAGGTTCTCATGGATATTTAGGCTTGAAAGTCCCTTTTGCTGATATACAAGCAGCAACTAACAATTTTGATAGAAATCTGATTATAGGATCTGGTGGGTTTGGTATGGTTTACAAAGGGACGCTCAAAGAAAATGTTAAGGTTGCGGTCAAGAGAGGAATGCCTGGGTCCAGGCAGGGCCTTCCAGAGTTCCAGACTGAAATAGCAGTTCTATCCAAAATTCGCCATCGTCATCTTGTTTCACTTGTTGGTTTTTGTGAAGAAAATTCAGAGATGATACTTGTCTACGAGTATGTTGAAAAAGGACCGCTTAAAAAGCATTTGTATGGCTCAGGACTACCTCCTTTGTCTTGGAAGCAGCGTCTCGAAATATGCATTGGTGCAGCTAGAGGTCTTCACTATCTTCACACTGGTTTTGCACAGGGAATCATCCACCGTGACATTAAATCAACCAACATATTGCTTGATGAAAATTATGTGGCCAAGGTTGCTGATTTTGGTCTTTCAAGATCCGGTCCATGTCTCAATGAGACCCATGTGAGTACTGGTGTGAAAGGCAGTTTTGGTTATCTAGATCCTGAGTATTTCCGAAGGCAGCAACTTACAGATAAATCAGATGTTTATTCATTTGGGGTTGTGCTTTTCGAGGTTCTTTGTGCCAGACCTGCTGTTGATCCACAGCTTACTAGGGAACAGGTGAATTTAGCAGAATGGGCACTTGAATGGCAGAAGAAGGGCATGCTGGAGCATATTGTCGATCCCCATATTGCTGGGCAGATCAAGCCCGAACCGTTGAAGAAATTCGGCGAAACAGCCGAGAAATGTTTGGCTGACTATGGTGTTGACAGGCCAACTATGGGAGATGTGTTATGGAATTTGGAATATGTACTTCAGATCCAAGAAGGTGGTCAATTAAGGGAACCAACAAACGACTTGACAGCTACTGTTACTGGAACTCCTCCTGACAACATGAGAACACAGAGATATTATGATAATTGTAATTCAGACATCAGTACTAGTGAAGTATTTTCTCAACTAATGACCAATGAAGGCAGATAG 2463 0.43 MAPQMFALPLILLVFLIPSSFSFTPVDNYLLNCGSHANASLFNRIFTGDSTKPGSDFLAAGNSITLVNRNSPPNSSTLYNTARVFTSAGSYKFHLKSNGTHLVRFHFSPFSAQGFDLKSAKFSVLVGGNTLLKAFQLRNGTLIKEYILKIESNLLEIEFEPVGDSAFGFVNALEVFTAPVDFILDYGARLVGSSGVEEYSNLSSQVLETVYRINVGGSKITPFNDTLWRTWIPDDDYLVFKEAAKRVASTHTPNYQNGSASPEIAPDHVYMTAQEMNRENSSLASRFNITWKFQVAPAGGGGVRHLVRLHFCDIVSSALNLLYFDVYLNGYSAYKDLDLSTLAVHVLASPFYVDFVADSDDSGFIEISVGPSDLNSLIRMNAILNGAEIMKMVNVMDSHVVHKRKTLWVLVGSLVGGVVLLLAVFGLLLAFMCRKRKPRQKTAESVGWTPLRMFGGSSLSRLSEALASPGSHGYLGLKVPFADIQAATNNFDRNLIIGSGGFGMVYKGTLKENVKVAVKRGMPGSRQGLPEFQTEIAVLSKIRHRHLVSLVGFCEENSEMILVYEYVEKGPLKKHLYGSGLPPLSWKQRLEICIGAARGLHYLHTGFAQGIIHRDIKSTNILLDENYVAKVADFGLSRSGPCLNETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPAVDPQLTREQVNLAEWALEWQKKGMLEHIVDPHIAGQIKPEPLKKFGETAEKCLADYGVDRPTMGDVLWNLEYVLQIQEGGQLREPTNDLTATVTGTPPDNMRTQRYYDNCNSDISTSEVFSQLMTNEGR 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5255g00058 820 Gene3D - 28 181 - -
Pral5255g00058 820 Gene3D - 206 394 - -
Pral5255g00058 820 ProSitePatterns Protein kinases ATP-binding region signature. 497 519 IPR017441 GO:0005524
Pral5255g00058 820 FunFam Receptor-like protein kinase FERONIA 567 780 - -
Pral5255g00058 820 PANTHER OS07G0166700 PROTEIN 478 768 IPR045272 GO:0004714|GO:0006468
Pral5255g00058 820 FunFam receptor-like protein kinase FERONIA 458 566 - -
Pral5255g00058 820 FunFam Putative receptor-like protein kinase 28 179 - -
Pral5255g00058 820 SUPERFAMILY Protein kinase-like (PK-like) 477 762 IPR011009 -
Pral5255g00058 820 Gene3D Transferase(Phosphotransferase) domain 1 567 779 - -
Pral5255g00058 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672|GO:0006468
Pral5255g00058 820 FunFam Receptor-like protein kinase FERONIA 206 394 - -
Pral5255g00058 820 Gene3D Phosphorylase Kinase; domain 1 464 566 - -
Pral5255g00058 820 ProSiteProfiles Protein kinase domain profile. 491 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5255g00058 820 CDD STKc_IRAK 497 762 - -
Pral5255g00058 820 Pfam Protein tyrosine and serine/threonine kinase 496 690 IPR001245 GO:0004672|GO:0006468
Pral5255g00058 820 SMART serkin_6 491 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5255g00058 820 Pfam Malectin-like domain 31 392 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5255g00058 Pral-Chr5255 383818 388264 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5255g00058 23 820 Receptor kinase-like Gene Family AT3G46290 49.939 0.0 761
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pral5255g00058 Malectin_like 1.5e-33 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5255g00058 - - gmx:100801169 1217.6