Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5255g00049 ATGGCTTCTGACCTCTTGAAGCTGAAGATCTTAGAGAAAAGCCATGTGAAGCCCAAGAGAAAAGTGGGCAAGAAGGAGTGCCAGCTCGTGACCTTCGATCTTCCATACCTGGCCTTCTACTACAACCAGAAGCTTCTGTTCTACAAAGGAGAGGACTATGAGGGGATGGTGAAGAAGCTGAAAGAAGGCCTGAGCGTGGCTCTTGAGGAGTTTTATCAGCTCGCAGGGAAGCTTGGGAAGGATGAAGAAGGGGTTTTCAGAGTAGAATATAACGACGAAGACGATGCAGAAGACGGCGGTGTTCCTGGCGTGGAGGTCGTTCAAGCTGTGGCTGAAGCTGATGTTTCAGTGGCGGACCTGACGGTTGCAGAAAGCACAAACACTTTGAAGGAACTCATTCCTTATACTGGCATCCTCAATTTGGAAGGCATGCATAGGCCTCTGGTGGCGATTCAGCTGACAAAGCTGAAAGACGGATTGGCAGTGGGATGCGCCTTCAACCATGCGGTCCTTGATGGAACGTCCACGTGGCACTTCATGAGCTCCTGGGCTGCGATCTGCAGCGGCGCGCCTTCAGTTTCGGTGTCTCCGTTCGTGGAACGAACAAAGGCCCGAAACACGCGCGTGAAGCTCGACGTCTCACTTCCGTCAGCGGACCCACTTTCTGCTAAATCCAACGGTGATGCTGAGCAGGCCCCACCACCACCAGTTCTCAGGGAGAAGATCTTCAAGTTCTCCGAGTCAGCCATCGATCAGATCAAGTCAACGGTCAACGCTGATCTCCCGTCGGACGGTTCAAAACCATTCTCCACATTCCAAGCCCTCTCCGTCCATATCTGGCGCCACGTAACGCATGCACGTAACCTGAAACCCGAAGACTACACTGTCTTCACCGTCTTCGTTGACTGCCGGAAACGGCTGGACCCACCGATGCCGCAAACTTACTTTGGAAACCTAATCCAGGCCATATTCACAGTCACGGCAGCCGGGTTGTTGTCGGCAAACCCGCCGGGGTTCGGTGCGTCTTTGATTCAGAAGGCCATTGAAGCACACACTGCGAAGGCCATAGATGAGCGGAACAAGGAGTGGGAGAGCGCACCGAAGATTTTCCAGTTCAAAGATGCCGGCGTGAACAGCGTGACGGTCGGAAGCTCCCCGCGGTTCAAGGTTTACGACGTGGATTTCGGGTGGGGCCCGCCGGAGAATGTGAGGAGTGGATCAAACAACAAGTTCGACGGAATGGTTTATCTGTATCCAGGTAAGAGTGGAGGAAGGAGCATCGATGTGGAGCTGACCTTGGAGAGTGAAGCTATGGCGAGGTTGGAGGAAGACAAGGAGTTCCTCATGGAGGTTTAA 1356 0.5339 MASDLLKLKILEKSHVKPKRKVGKKECQLVTFDLPYLAFYYNQKLLFYKGEDYEGMVKKLKEGLSVALEEFYQLAGKLGKDEEGVFRVEYNDEDDAEDGGVPGVEVVQAVAEADVSVADLTVAESTNTLKELIPYTGILNLEGMHRPLVAIQLTKLKDGLAVGCAFNHAVLDGTSTWHFMSSWAAICSGAPSVSVSPFVERTKARNTRVKLDVSLPSADPLSAKSNGDAEQAPPPPVLREKIFKFSESAIDQIKSTVNADLPSDGSKPFSTFQALSVHIWRHVTHARNLKPEDYTVFTVFVDCRKRLDPPMPQTYFGNLIQAIFTVTAAGLLSANPPGFGASLIQKAIEAHTAKAIDERNKEWESAPKIFQFKDAGVNSVTVGSSPRFKVYDVDFGWGPPENVRSGSNNKFDGMVYLYPGKSGGRSIDVELTLESEAMARLEEDKEFLMEV 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5255g00049 451 Pfam Transferase family 7 447 - -
Pral5255g00049 451 FunFam Tryptamine hydroxycinnamoyl transferase 223 445 - -
Pral5255g00049 451 Gene3D - 218 443 IPR023213 -
Pral5255g00049 451 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 10 448 - -
Pral5255g00049 451 Gene3D - 5 214 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5255g00049 Pral-Chr5255 312993 316794 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5255g00049 6 451 Monolignol Biosynthesis Gene Families AT5G48930 25.325 3.67e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5255g00049 K19747 - gmx:100790669 690.263