Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5255g00043 ATGCCTCCATGGTGGGGGAAATCATCATCAAAAGAACCCAAGAAGAAAGGAAGTAAAGAAAGTTTCATTGATGCATTACAAAGAAAACTTAAAATCCCATCTGAAGGTAAGGTAAGTGGCAGGTGTGGAGGACCTCGGAGAAACTGCAATGACACAGTTTCAGAGAAGGGGGCTCAGTCTCCAGTTGAATCAAGGTCTCCTTCACCATCCAAAGTAGCACGGTGTCAAAGTTTTGCTGAAAGGCCTCTTGCCCAGCCACTACCACTTCCTGGCAGGAATCCTGCATGTATAGGACGAACAGATTCTGAAATTTGCCTATCATCAAAGTCAAGAGGGGAGAAGGGTTCCAAGACATCGTTGTATCTGCCACTTCCAAGACCTGCATGCATACGTAGTAGGCGAAAGACTGCAGATTTAGATGGAGACCCTATCACTGCCTCTGTATGTAGTGACAGCTCTGCTGACAGTGATGAGCCAGCTGATTCATGTCAACGCAGTCCACTGGCAATTGACTCAGAGACTGGGACTAGAACTGCTGCTGGCAGCCCTTCCAGTTCAATGCTCAAGGATCAATCATCTACTGGTTTGCAACTAAATTCAAGAGAGTTCAAAAAGCCAGCAAACATTCTGAGTAATCATGTATCTCCTCCGTCCCCCAAACGGAGACCTTTAAGCAATCACGTGCCAAATCTGCAGGTTCCTCCCCATGGTGCTTTCTATAGTGCTCCTGACAGCTCCAAGTCAAGTCCATCAAGAAGTCCACTGAGAGCGTTTGGCCCAGAACAAGTGCCGAGCTCTGCTTTTTGGGCTGGAAAGCAATATTCAGAGGTCAATTTTATTGGATCTGGGCACTGCTCCAGTCCAGGTTCTGGTCAGAACTCTGGGCATAATTCAATGGGAGGGGACATGACAGGACAGATATTTTGGCAACCAAGTAGGGGTAGCCCTGAGTATTCTCCTGTTGTTAGCCCCAGAATGACTAGTCCTGGTCCGAGCTCTAGGATTCAGAGTGGAGCGGTCACACCCATTCATCCTAGATCTGGGGCAACACCCACTGAATCACAGACTGGATGGGTTGATGATGGGAAACAACAGAGTCATCGTCTGCCTCTTCCACCCCTAACAGTTACAAACTCCTCACCTTTCTCTCACTCAAATTCAGCAGCAACATCTCCATCTATGCCAAGAAGTCCAGGAAGAGCAGATAATCCTTTGAGCCCTGGCTTTCGATGGAAAAAGGGAAAGCTGCTTGGAAGAGGCACATTTGGACATGTCTATGTTGGCTTCAATAGTGAAAATGGTGAGATGTGTGCAATGAAGGAGGTGACGTTGTTTTCAGATGATGCCAAGTCCAAGGAAAGTGCTAAGCAATTAATGCAGGAAATTGCTCTATTAAGTCGATTACGGCATCCCAATATTGTGCGGTATTATGGTTCTGAAACGGTAGATGACAAGCTTTACATATACCTGGAATATGTATCTGGAGGTTCCATATATAAACTTCTTCAAGAATATGGGCAATTTGGTGAACTAGCCATCCGCAATTATACCCAACAAATTTTGTCGGGACTTGCTTATTTACATGCTAAAAATACTGTCCACAGGGACATCAAGGGAGCAAATATACTTGTAGATCAAAATGGCCGGGTAATCAAGCTGGCGGACTTTGGCATGGCAAAACATATAACAGGGCAGTCATGTCCATTATCATTCAAGGGAAGTCCTTATTGGATGGCTCCTGAGGTCATAAAGAACTCTAGTGGCTGCAGCCTTGCTGTGGATATATGGAGTCTTGGTTGCACAGTTTTAGAAATGGCTACAACTAAGCCTCCTTGGAGTCAGTATGAAGGGGTTGCTGCCATGTTTAAGATTGGTAATAGCAAGGAACTCCCAACAATCCCAGATCACCTCTCAAATGAAGGAAAGGATTTCGTTCGGAAATGTCTACAACGTAACCCACATGATCGTCCTTCGGCCCAGCAACTATTGGAACACCCTTTTGTAAAGTGTGCTGCACCTTTGGAAAGACCTATTCTGGTTGGTGAAGCGTCAGATCAGGTCTCTGGTATTGCGCAAGGAGCAAAACCTCTGGGCGCTGGACAAGGCAGAAACCTCTCTGCCCTGGATAATGACAGAGTTTCTGTTCATTCTTCTAGGGTGTTGAAAACCAATCCGCATGCTAGTAATGAAATCCATATTCCAAGGAATATTTCTTGCCCTGTCTCTCCCATTGGAAGCCCACTTTTGCGGTCAAGATCACCACAGCACATGAATGGGAGAATGTCTCCTTCTCCTATATCTAGCCCCCGTACTGTTTCTGGTGCATCCACGCCTCTTACTGGTGGTAGTGGTGCCATTCCATTTGGCAATCACCTGAAACAGTCAGCTTATTATCAAGACGGTCTTGCAAACTTGCCAAAGCACTCAAATAGCATCTACATTAATGCCCCTGCTCATCATGACTCTGGCATTGACATCTTTCGCAATCTGCAAATGGGTTCTCAAACAGAATTGATTCTGAGTGAAAATGATGTTATGGGGAAGCATTTTGCGAGGCCTCCTGTCGAGCCTTATGATGTTCAGTCAGTCTTGGCTGATCGTGTTTCTAGACAGCTACTGGGAGATCATGTTAAGATCAAACCGTCGCTGGATCTTAGTCCCAACTCTCCTTTGCTCAACCGGTCAAATGGTCTATGA 2697 0.4587 MPPWWGKSSSKEPKKKGSKESFIDALQRKLKIPSEGKVSGRCGGPRRNCNDTVSEKGAQSPVESRSPSPSKVARCQSFAERPLAQPLPLPGRNPACIGRTDSEICLSSKSRGEKGSKTSLYLPLPRPACIRSRRKTADLDGDPITASVCSDSSADSDEPADSCQRSPLAIDSETGTRTAAGSPSSSMLKDQSSTGLQLNSREFKKPANILSNHVSPPSPKRRPLSNHVPNLQVPPHGAFYSAPDSSKSSPSRSPLRAFGPEQVPSSAFWAGKQYSEVNFIGSGHCSSPGSGQNSGHNSMGGDMTGQIFWQPSRGSPEYSPVVSPRMTSPGPSSRIQSGAVTPIHPRSGATPTESQTGWVDDGKQQSHRLPLPPLTVTNSSPFSHSNSAATSPSMPRSPGRADNPLSPGFRWKKGKLLGRGTFGHVYVGFNSENGEMCAMKEVTLFSDDAKSKESAKQLMQEIALLSRLRHPNIVRYYGSETVDDKLYIYLEYVSGGSIYKLLQEYGQFGELAIRNYTQQILSGLAYLHAKNTVHRDIKGANILVDQNGRVIKLADFGMAKHITGQSCPLSFKGSPYWMAPEVIKNSSGCSLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDHLSNEGKDFVRKCLQRNPHDRPSAQQLLEHPFVKCAAPLERPILVGEASDQVSGIAQGAKPLGAGQGRNLSALDNDRVSVHSSRVLKTNPHASNEIHIPRNISCPVSPIGSPLLRSRSPQHMNGRMSPSPISSPRTVSGASTPLTGGSGAIPFGNHLKQSAYYQDGLANLPKHSNSIYINAPAHHDSGIDIFRNLQMGSQTELILSENDVMGKHFARPPVEPYDVQSVLADRVSRQLLGDHVKIKPSLDLSPNSPLLNRSNGL 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5255g00043 898 MobiDBLite consensus disorder prediction 285 340 - -
Pral5255g00043 898 Gene3D Transferase(Phosphotransferase) domain 1 410 686 - -
Pral5255g00043 898 SMART serkin_6 411 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5255g00043 898 MobiDBLite consensus disorder prediction 1 196 - -
Pral5255g00043 898 MobiDBLite consensus disorder prediction 285 408 - -
Pral5255g00043 898 MobiDBLite consensus disorder prediction 146 160 - -
Pral5255g00043 898 MobiDBLite consensus disorder prediction 209 259 - -
Pral5255g00043 898 Pfam Protein kinase domain 412 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5255g00043 898 MobiDBLite consensus disorder prediction 9 35 - -
Pral5255g00043 898 SUPERFAMILY Protein kinase-like (PK-like) 410 774 IPR011009 -
Pral5255g00043 898 MobiDBLite consensus disorder prediction 753 780 - -
Pral5255g00043 898 FunFam Mitogen-activated protein kinase kinase kinase 409 693 - -
Pral5255g00043 898 MobiDBLite consensus disorder prediction 370 397 - -
Pral5255g00043 898 MobiDBLite consensus disorder prediction 347 362 - -
Pral5255g00043 898 MobiDBLite consensus disorder prediction 52 73 - -
Pral5255g00043 898 CDD STKc_MEKK1_plant 410 668 - -
Pral5255g00043 898 ProSitePatterns Protein kinases ATP-binding region signature. 417 440 IPR017441 GO:0005524
Pral5255g00043 898 MobiDBLite consensus disorder prediction 167 196 - -
Pral5255g00043 898 ProSiteProfiles Protein kinase domain profile. 411 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5255g00043 898 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 60 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5255g00043 Pral-Chr5255 265340 272769 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5255g00043 3 887 MAP Kinase Kinase Kinase AT1G63700 58.567 0.0 873
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pral5255g00043 Pkinase 5.2e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5255g00043 K20717 - gmx:100792783 1409.43