Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5255g00023 ATGGAGTTTCTAGCTTTGGCCCCTGCCTTCCTCTCATCTTTAGCTCTCCTCATGTTCTTGAAGCTAACATTATCTTGGTGGCTTTTCCCTATTCTCACTCGTCATCAGCTCAAGAGATGTGGATTCACAGGGCCTGCCCCAAGCTTTCCTTTCGGAAACATTCGAGACATGAAGAAGAAGAAGAAGAATCATATCAATACTTCTTCTGATTCTCTCGAATATTCCTCCGACTGTCTCTCCCATGATATTCACCCCACCGTCTTTCCTTATTTTTCTCGCTGGCAAGATTCTCACGGAAAGGTTTTCGTGTACTGGCTTGGAACAGAGCCATTTTTGTACATAGCAGAGCCAGAACTTGTGAAGAAGATGTCAACGGAGGTGATGGCCAAGAGATGGGGAAAGCCAAGTGTGTTCCGAAACGACAGAGATCCAATGTTTGGAAATGGTCTGGTCATGGTCGAAGGCAACGACTGGGTTCGTCACCGCCACGTTGTTGCGCCAGCATTCTCTCCCCTTAACCTCAAGGCCATGGCAAGTATGATGGTGGAATCGACAAAGCAAATGATAGAGAGATGGACGAGCCAGATAAACTCCGGCAGCAGCAACATGGAAATCGACGTTGAAAATGAGATCATCACGACGGCCGGAGAGATCATAGCACGAACAAGCTTCGGCATGAAGGATGAGAAAGCAAGACAAGTGTTTAAAAAACTAAGAGCCCTCCAGATGACCCTTTTCAAGACGACAAGATACGTGGGGGTTCCATTTGGCAAGTGTTTGAACGTGAAGAAAACCCTAGAAGCCAAGAAACTGGGCAAAGAAATCGACAAGGTGTTATTATCTGTCATAAGAAACCGAAAGTCCTCAGCATCGTCAAGTGCTGAGAAGACCAATAAACAAGAACAGGACTTGTTGGGATTGTTACTTCAAGAAAATCGCCACACGTTGACGACAAGAGAACTTGTTGATGAGTGCAAAACGTTCTTCTTTGGAGGACACGAGACAACGGCATTGGCCATCACATGGACTTTGTTGCTTCTTGCGGAGCATCAAGATTGGCAGATTCAACTGAGAGACGAAATAAGGCAAGTTTTGGGTGATAATATTGACCAGCTTGATATCAACTTGCTTTCTGAGCTGAAAAAGATGAAGTGGGTGATGAATGAAGTTCTAAGACTATACCCACCAGCCCCAAACGTTCAAAGGCAAGCAAGAGAAGACATCAAAGTAGGCGAAAACCTAACGGTGCCAAATGGAACCAACCTGTGGATCGATGTGGTGGCGATGCACCATGACGCCGCCCTATGGGGATCGGACGTGAATGAGTTCCGGCCGGAGAGGTTCAGGGACGACGTAAACGGCGGGTGCAAGCACGCCATGGGGTACTTGCCGTTTGGGTTCGGAGGAAGAATGTGTGTGGGAAGAAACCTAACGTTCATGGAATATAAGATCGTGCTAACCCTACTTCTGTCTACGTTTACCTTTGAACTCTCACCTTCTTATCATCATTCTCCTTCCATCATGCTCTCCTTGAGGCCCTCTTGTGGACTTCCTCTCCTTGTGAAGCCTCTTCACAAATATTGA 1584 0.4665 MEFLALAPAFLSSLALLMFLKLTLSWWLFPILTRHQLKRCGFTGPAPSFPFGNIRDMKKKKKNHINTSSDSLEYSSDCLSHDIHPTVFPYFSRWQDSHGKVFVYWLGTEPFLYIAEPELVKKMSTEVMAKRWGKPSVFRNDRDPMFGNGLVMVEGNDWVRHRHVVAPAFSPLNLKAMASMMVESTKQMIERWTSQINSGSSNMEIDVENEIITTAGEIIARTSFGMKDEKARQVFKKLRALQMTLFKTTRYVGVPFGKCLNVKKTLEAKKLGKEIDKVLLSVIRNRKSSASSSAEKTNKQEQDLLGLLLQENRHTLTTRELVDECKTFFFGGHETTALAITWTLLLLAEHQDWQIQLRDEIRQVLGDNIDQLDINLLSELKKMKWVMNEVLRLYPPAPNVQRQAREDIKVGENLTVPNGTNLWIDVVAMHHDAALWGSDVNEFRPERFRDDVNGGCKHAMGYLPFGFGGRMCVGRNLTFMEYKIVLTLLLSTFTFELSPSYHHSPSIMLSLRPSCGLPLLVKPLHKY 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5255g00023 527 Pfam Cytochrome P450 88 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5255g00023 527 SUPERFAMILY Cytochrome P450 85 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5255g00023 527 Gene3D Cytochrome P450 27 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5255g00023 527 PRINTS E-class P450 group I signature 472 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5255g00023 527 PRINTS E-class P450 group I signature 95 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5255g00023 527 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5255g00023 527 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5255g00023 527 PRINTS E-class P450 group I signature 462 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5255g00023 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 465 474 IPR017972 GO:0005506|GO:0016705
Pral5255g00023 527 PANTHER CYTOCHROME P450 FAMILY MEMBER 18 509 - -
Pral5255g00023 527 PRINTS P450 superfamily signature 331 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5255g00023 527 PRINTS P450 superfamily signature 472 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5255g00023 527 PRINTS P450 superfamily signature 385 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5255g00023 527 PRINTS P450 superfamily signature 463 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5255g00023 Pral-Chr5255 162497 166478 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5255g00023 17 524 Cytochrome P450 AT5G52400 60.118 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5255g00023 - - pcin:129293793 887.871