Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5255g00007 ATGCCATCCCGGCGGTTCTCCACATCGCCGCCGTCTGAGGTGGTTGCCGTCGACCCATATCCACCTTGTTCCCTCTTTTTTCTCGCTTTCCTCTGTTTTCGGAGACGCACCAGAAAACGCACTACCCCTTCTTCTGATTCCGAGTCAAAGCCTCCGCATCGCTTCTCCTACTCCTCCATCCGCCTCGCCACCGCCTCCTTCTCGACCCGAATAGGCCACGGCGGGTTCGGACCTGTCTTCTCCGGTGTTCTGCCTCCGACACGAAAGCCCATCGCCGTCAAGCTCATGGACTCTGCCTCTATCCAAGGCGAGCGCGAGTTTCACAACGAGCTTTTCTTCGCTTCCAAGCTTTGTTCCCCACATGTCGTCGTCGCGATAGGCTCCGCCTCCGATAGGAGTCACAGAAGATTCTTGCTGGTGTACGATCTAATGCCCAACGGAAATCTTCACGATGCTCTGTTGCGACGGAAGAGCCTTGAGCTGATGAATTGGAAGAAACGTTTCGCGATAATTATTGATATAGCTAAAGGAATCCGTTACCTTCATTCGTGCGACCCACCTGTGATTCATGGAGATATCAAGCCGAGTAATATTCTACTGGACTCTTCTTTCTCAGCAAAAATCGCTGATTTCGGTCTGGCTCGGTTGAAATCGGAATCCCAGTACGATTTTGATATCTTCAGTGGAATCGATTATTCGGGGTCTGTGGTGGAGGAAACAGGGAGCGTGAATACTGGTTTTGAGGAGCAAACAGTATCCATGGTAGAAACATCGCCGGAGACAGACTTCCCGGCCAAGGAAAATTGCGACAGGGGTAAGAAGAACGCCGAGAGGTTGAAGAGCAGGTCAATGAAGGATTGGTGGAGGAAGGAGGACGATGACAAGAAAAAGAGCAAGAAGCAATTCGAATGGTGGAGGGAGGAGTACCGCGAGAAGCTGGAAAAGAAGAACAAGGAAAAGGGATTCTACAGTGATGAGGAAGCATTTGATAGAGAAATGAAGAAGAACAAAAGAAGAGGCAGGAGTATCGATTGGTGGTTCGACGGAATTAGCCGGAACAGCCATGATTCTTTTAGCGGAGAAATTCACAATCCCAAGAGTGGAGGAATCAGCAGTACTCCAAGTTTGAAAGGAACAGTTTGTTACGCAGCTCCAGAGTACAGTCATGGCGGAGAAATAACAGAAAAATGCGACGTTTACAGTTTTGGGGTCCTATTGCTCGTGATAGTTTCAGGAAGACGGCCAATTGAGATGGTGAGCGGCTCGCCATTGTCAGAGCTTCAAAGGGGGAATCTATTGTACTGGGCACGCCATTGTGCGCGAAACGGGAAGCTTGTAGAACTGGCGGATCAGAACATGTGCATGAAGTTGCCGGAGAAAGAGGAGGCCATACTCTGCATTAAAGTGGCTCTGCTCTGTCTGGTGAAGTCACCGTCTCGTCGACCTTCAATGGAAGAGGTTGTGAGAATGCTGGGCGGAGACATGGAGCCACCGCAGTTGCCGACCGAATATTCATCTTCATCACCATCTCCATTTCCCCTCAAGTCTGGGAAAAACGCGCATTGA 1566 0.5019 MPSRRFSTSPPSEVVAVDPYPPCSLFFLAFLCFRRRTRKRTTPSSDSESKPPHRFSYSSIRLATASFSTRIGHGGFGPVFSGVLPPTRKPIAVKLMDSASIQGEREFHNELFFASKLCSPHVVVAIGSASDRSHRRFLLVYDLMPNGNLHDALLRRKSLELMNWKKRFAIIIDIAKGIRYLHSCDPPVIHGDIKPSNILLDSSFSAKIADFGLARLKSESQYDFDIFSGIDYSGSVVEETGSVNTGFEEQTVSMVETSPETDFPAKENCDRGKKNAERLKSRSMKDWWRKEDDDKKKSKKQFEWWREEYREKLEKKNKEKGFYSDEEAFDREMKKNKRRGRSIDWWFDGISRNSHDSFSGEIHNPKSGGISSTPSLKGTVCYAAPEYSHGGEITEKCDVYSFGVLLLVIVSGRRPIEMVSGSPLSELQRGNLLYWARHCARNGKLVELADQNMCMKLPEKEEAILCIKVALLCLVKSPSRRPSMEEVVRMLGGDMEPPQLPTEYSSSSPSPFPLKSGKNAH 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5255g00007 521 Pfam Protein tyrosine and serine/threonine kinase 375 491 IPR001245 GO:0004672|GO:0006468
Pral5255g00007 521 SUPERFAMILY Protein kinase-like (PK-like) 48 505 IPR011009 -
Pral5255g00007 521 Gene3D Transferase(Phosphotransferase) domain 1 50 245 - -
Pral5255g00007 521 Pfam Protein kinase domain 68 221 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5255g00007 521 PANTHER OS07G0586332 PROTEIN 25 292 IPR044576 -
Pral5255g00007 521 FunFam Os07g0541700 protein 144 225 - -
Pral5255g00007 521 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Pral5255g00007 521 MobiDBLite consensus disorder prediction 257 277 - -
Pral5255g00007 521 Coils Coil 306 326 - -
Pral5255g00007 521 Gene3D Transferase(Phosphotransferase) domain 1 349 498 - -
Pral5255g00007 521 MobiDBLite consensus disorder prediction 491 521 - -
Pral5255g00007 521 MobiDBLite consensus disorder prediction 500 514 - -
Pral5255g00007 521 SMART serkin_6 65 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5255g00007 521 ProSiteProfiles Protein kinase domain profile. 65 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5255g00007 521 MobiDBLite consensus disorder prediction 263 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5255g00007 Pral-Chr5255 39823 41733 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5255g00007 360 491 Receptor kinase-like Gene Family AT3G58690 34.586 1.40e-13 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Pral5255g00007 Pkinase 2.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5255g00007 - - aprc:113872924 505.753