Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5253g00001 ATGATCAAAACTCGCCACCGAAACATTGTGAAGTTGTATGGATTCTGCTCACAAAGATTGCACACATTTCTAATTTATGAGCACATCAAAAGAGGGAGCTTATTTGATATGCTTAGAAACGATAAAGAAGCATTAGAGTTGGGTTGGTCACAGAGGGCTCATATTATCAAGGGGTTAGCAGAGGCCTTATCATATATACATCATGATTGTAATCCAGCCATTGTTCACAGAGACATATCAAGCAAGAATGTTTTATTATCTTCAAACTTCGAAGTCCATCGCTCAGACTTTGGCACAGCAAGGTTCTTGAAAATCTATTCATCAATTTGGACCACTTTTGCTGGCACATACGGTTATGCTGCTCCAGAGCTTGCGTACACAATGGCAGTGACTGAGAAAGTTGATGTGTATAGCTTTGGTGTTTTGGCCATTGAGTTGCTAATGGGAGAGCATCCTGGTGATTTTATATCATGTATTCAGATGTGTGGGAAGGCCATATCATCTTGGAAGATATTTTGGACCCTCGTTTATCATCAATGA 540 0.3981 MIKTRHRNIVKLYGFCSQRLHTFLIYEHIKRGSLFDMLRNDKEALELGWSQRAHIIKGLAEALSYIHHDCNPAIVHRDISSKNVLLSSNFEVHRSDFGTARFLKIYSSIWTTFAGTYGYAAPELAYTMAVTEKVDVYSFGVLAIELLMGEHPGDFISCIQMCGKAISSWKIFWTLVYHQ 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5253g00001 179 Gene3D Transferase(Phosphotransferase) domain 1 33 171 - -
Pral5253g00001 179 Pfam Protein kinase domain 3 152 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5253g00001 179 SUPERFAMILY Protein kinase-like (PK-like) 2 172 IPR011009 -
Pral5253g00001 179 Gene3D Phosphorylase Kinase; domain 1 1 32 - -
Pral5253g00001 179 ProSiteProfiles Protein kinase domain profile. 1 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5253g00001 179 PANTHER LEUCINE RICH REPEAT KINASE 2 2 157 - -
Pral5253g00001 179 ProSitePatterns Tyrosine protein kinases specific active-site signature. 74 86 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5253g00001 Pral-Chr5253 5018 5650 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5253g00001 1 122 Receptor kinase-like Gene Family AT4G08850 59.016 1.03e-47 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral5253g00001 Pkinase 1.2e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5253g00001 - - gmx:100813275 254.218