Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5251g00011 ATGCTCGAACAAGATCATTTCTCCTTTCCACTTCAAGTTCAAAACTTGCTGTTATTTCTGTCTTCGTTTCTGTTATTTTCACTTTGCTCCTTTGTTGCTCCTTCTAGGCCTCTCTTGCCTCATCCTCCACCTGCACTTCCTCCGATTTTTCCTCCTGATTCTGCCGCCTTACTGTCATTCAAATCCAAAGCTGATCTCAACGATCGCCTCCTTTTCTCCCCTAACACCTCCAGAGATGCTTTCTGCAAATGGCAGGGCGTTCAATGCAATGCAAAACAGAAAGTGGAGCGTCTCGTTCTTCAGGGTTTAGATCTCGGTGGTATTTTCGCTCCCAACACATTGTCTCGTCTTGACCAGCTCCGGGTGCTCAGTTTGCAGAACAACTCTCTCGTTGGACCCATCCCTGATCTCTCCGGTCTCCACAACCTCAAGAGCCTCTTCCTCGATAACAACCACTTCACGGGTTCTTTTCCTCCCTCAATCCTCACCCTCCATAGGCTCCGCACGTTGGACTTCTCTCACAACAATCTCTCAGGCCCCATCCCTACCTACTTAACCAAGCTAGACCGTTTCTACTACCTCCGTCTCGGCTGGAATAGATTCAATGGCTCCATCCCTCCTTTCAATCAGTCTTCTCTCCGAACATTCGACGTCTCTGGTAACAACTTTTTCGGACCTATTCCTGTTACGCCCACTTTAGTGCGTTTGGGACCCACCCCCTTCTCTCAAAACCCAGGCCTCTGCGGCGAAATCATCCGCAAAGAATGCCATCCAAGCGCACCTTTCTTTGCACCAGCGGCACCACTCGTGACAGCGCCGCCGCCGGCGGTGCAGCTTGGTCAGAGTGCCCAAGTCCACGGCGTTGACGGGTTGATTCGTCCACCGTACAAGAAAAGGCACAACAGAAATGCAGTTATTATTGGGTTCTCCGCAGGGGTTTGCGTTCTGATCGCTTCGCTTGTCTGTTTCGTGGTGGCCTTGAGGAAACAGGGAGATAAGAAGGAGTCTTCGAGGACTCTTATGGATTCTGATGGGGCGGCGGCGGCAGAAGCTGCGGCGGCGATGCAAATGGAGCAGGAGAAGGAGCTGGAGGAGAAGGTGAAGAAGGTGCAGGGGATGCAAGTGGGGAAGAGTGGGAGCTTAATGTTCTGTGCGGGGGAGGCGCAGCTCTATACGCTGGATCAGCTTATGAGAGCCTCTGCGGAGCTTTTGGGGAGGGGATCGTTGGGGACTACATACAAAGCGGTTTTAGATAACCGTTTGATTGTCACTGTGAAGCGCCTCGATGCTACTAAAATGGCTGCGGACTCAACCAAGGAAATCTTTGATAGTCATATGGAATCAGTAGGCGGGCTTCGCCACCCCAATTTGGTCCCCCTTAGGGCCTATTTTCATGCCCGGGAAGAGAGGCTTCTTATCTATGATTACGAGCCTAATGGCAGTCTTTTCTCCCTCGTACACGGTTCAAGATCAAGCAGGGCAAGGCCATTGCACTGGACGTCGTGTTTGAAGATAGCAGAGGACGTCGCACAAGGGCTGTCCTACATCCACCAAGCCTGGAGACTAGTACATGGCAATCTAAAGTCCTCCAACGTTTTGCTGGGCCCTGATTTTGAAGCGTGCATAACTGATTACTGTCTCTCCATGTTGGCCAACCCTTCCAGCTTCCATGAAGATCCCGATTCCGCTGCGTATAGAGCGCCCGAGACCCGCAATCCGAATCACCAGCCAAACCCGAAATCTGACGTTTACGCTTATGGTGTGTTGTTGCTGGAACTTTTGACGGGGAAGCCTCCTTCGGAACACCCTCTCTTGGTGCCCAGTGATAGGGTGAGTTGGGTGAAATCCGTGCGGGAAGATAAGGGAGGAGAAGACAACAGAATGGACATGCTTGTTGAGGTTGCTACTACTTGTAGCTTGACCTCTCCTGAGCAGAGGCCCACTATGTGGCAGGTCTTGAAGATGCTGCACGAAATTAAAGAGATTGTATTATTGGAGGATAGTGCGTTGGACCTACGCGCCACCACGTCTTAA 2034 0.5143 MLEQDHFSFPLQVQNLLLFLSSFLLFSLCSFVAPSRPLLPHPPPALPPIFPPDSAALLSFKSKADLNDRLLFSPNTSRDAFCKWQGVQCNAKQKVERLVLQGLDLGGIFAPNTLSRLDQLRVLSLQNNSLVGPIPDLSGLHNLKSLFLDNNHFTGSFPPSILTLHRLRTLDFSHNNLSGPIPTYLTKLDRFYYLRLGWNRFNGSIPPFNQSSLRTFDVSGNNFFGPIPVTPTLVRLGPTPFSQNPGLCGEIIRKECHPSAPFFAPAAPLVTAPPPAVQLGQSAQVHGVDGLIRPPYKKRHNRNAVIIGFSAGVCVLIASLVCFVVALRKQGDKKESSRTLMDSDGAAAAEAAAAMQMEQEKELEEKVKKVQGMQVGKSGSLMFCAGEAQLYTLDQLMRASAELLGRGSLGTTYKAVLDNRLIVTVKRLDATKMAADSTKEIFDSHMESVGGLRHPNLVPLRAYFHAREERLLIYDYEPNGSLFSLVHGSRSSRARPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACITDYCLSMLANPSSFHEDPDSAAYRAPETRNPNHQPNPKSDVYAYGVLLLELLTGKPPSEHPLLVPSDRVSWVKSVREDKGGEDNRMDMLVEVATTCSLTSPEQRPTMWQVLKMLHEIKEIVLLEDSALDLRATTS 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5251g00011 677 Gene3D Phosphorylase Kinase; domain 1 364 476 - -
Pral5251g00011 677 Coils Coil 346 366 - -
Pral5251g00011 677 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 24 660 IPR046959 -
Pral5251g00011 677 Gene3D Ribonuclease Inhibitor 209 260 IPR032675 -
Pral5251g00011 677 Pfam Protein kinase domain 401 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5251g00011 677 Gene3D Ribonuclease Inhibitor 52 208 IPR032675 -
Pral5251g00011 677 Gene3D Transferase(Phosphotransferase) domain 1 478 669 - -
Pral5251g00011 677 SUPERFAMILY L domain-like 50 247 - -
Pral5251g00011 677 ProSiteProfiles Protein kinase domain profile. 398 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5251g00011 677 SUPERFAMILY Protein kinase-like (PK-like) 402 661 IPR011009 -
Pral5251g00011 677 FunFam Nuclear pore complex protein NUP107 51 207 - -
Pral5251g00011 677 MobiDBLite consensus disorder prediction 558 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5251g00011 Pral-Chr5251 68107 71779 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5251g00011 20 677 Receptor kinase-like Gene Family AT5G43020 56.721 0.0 698
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral5251g00011 Pkinase 4.5e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5251g00011 - - qsa:O6P43_016036 907.516