Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5250g00016 ATGAGTTGCTTTCCTTGTTTTTCATGCAACGACAAGAAAGCAGCACAGAAGAAGCCCAAACAAGGAATTAGGGCACAAATGCAACCATGTCAGCCTCAAAAAGAAGCCCTGCTTCCTCACGTCCGCCCAGAAGAGAATAATTATTCTTCAAAGCCAAGTGAGGGAAGACCAAATAATAATAGCAATGCAAACAAAGATGGCGGCAACAATAACATCGTCGCCGAAACTTTTACCTTTCGAGAATTGGCCGCCGCCACCAGGAACTTTCGGCGAGAATGTCTCATTGGTGAAGGTGGTTTCGGAAGAGTTTATAAGGGAAAACTCGATAAAACCAACCAGATTGTAGCTGTGAAACAGCTCGACAGAAATGGATTGCAAGGGAATAGAGAGTTCCTTGTTGAAGTGTTGATGCTAAGCCTCCTGCACCATGAAAATCTGGTGAATCTTATTGGATATTGTGCGGATGGAGATCAAAGATTATTGGTGTACGAGTACATGCCTTTGGGATCTGTAGAAGACCATCTTCTTGATCTAGAACCGCACGAGAGGCCATTAGATTGGGGTGTGAGGATGAAGATAGCTTTGGGAGCATCGAAAGGTCTGGAATATTTGCACGACAAGGCGAATCCTCCTGTGATATACCGAGACTTGAAGGCCTCAAATATATTGCTGGACAAGGGGTTTCATGCAAAACTGTCGGATTTTGGATTGGCCAAGCTTGGACCCACAGGAGACAAGTCTCATGTCTCCTCCCGAATTATGGGAACCTATGGTTACTGTGCTCCTGAGTATCAAAGAACTGGTCAGCTCACTGTCAAATCTGATGTCTACAGTTATGGTGTCGTTTTGCTAGAACTCATCACGGGAAAGCGAGTGATTGACAACACCAGACCCACCCGCGAGCAAAATCTTGTTTCTTGGGCACGACCAATATTCAAGGATCCCAATAGATACCTAGAGCTGGCTGATCCCCTTCTTCAAAGAAACTTCCCTGTCAGAGCCTTTAACCAAGCGGTGGCAGTGGCCGCCATGTGCCTTAACGAGGAACCCTCTGCCCGACCCTTGATCAGCGACGTAGTCACCGCCCTCACTTTTCTCGGCACAGGCTCCGAAGCCGACCACCCTTCCCCCGCCACCGACATTTCGCCCTCCCCAACGCAACCACATTCCAACCTTCTTGATAACGACAACGATGCCGAACGTCAGCGAGCCGTTGCTGAAGCCATAAAATGGGGTTCGGCTTCTAGGAATAATGCTGTACACACAGCAAATGCAAATTCTCCCTCTTTGTAA 1293 0.4756 MSCFPCFSCNDKKAAQKKPKQGIRAQMQPCQPQKEALLPHVRPEENNYSSKPSEGRPNNNSNANKDGGNNNIVAETFTFRELAAATRNFRRECLIGEGGFGRVYKGKLDKTNQIVAVKQLDRNGLQGNREFLVEVLMLSLLHHENLVNLIGYCADGDQRLLVYEYMPLGSVEDHLLDLEPHERPLDWGVRMKIALGASKGLEYLHDKANPPVIYRDLKASNILLDKGFHAKLSDFGLAKLGPTGDKSHVSSRIMGTYGYCAPEYQRTGQLTVKSDVYSYGVVLLELITGKRVIDNTRPTREQNLVSWARPIFKDPNRYLELADPLLQRNFPVRAFNQAVAVAAMCLNEEPSARPLISDVVTALTFLGTGSEADHPSPATDISPSPTQPHSNLLDNDNDAERQRAVAEAIKWGSASRNNAVHTANANSPSL 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5250g00016 430 MobiDBLite consensus disorder prediction 46 70 - -
Pral5250g00016 430 SUPERFAMILY Protein kinase-like (PK-like) 74 385 IPR011009 -
Pral5250g00016 430 Pfam Protein kinase domain 92 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5250g00016 430 Gene3D Transferase(Phosphotransferase) domain 1 166 375 - -
Pral5250g00016 430 Gene3D Phosphorylase Kinase; domain 1 60 165 - -
Pral5250g00016 430 MobiDBLite consensus disorder prediction 375 393 - -
Pral5250g00016 430 SMART serkin_6 89 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5250g00016 430 MobiDBLite consensus disorder prediction 17 70 - -
Pral5250g00016 430 MobiDBLite consensus disorder prediction 368 402 - -
Pral5250g00016 430 FunFam Serine/threonine-protein kinase PBS1 166 380 - -
Pral5250g00016 430 ProSiteProfiles Protein kinase domain profile. 89 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5250g00016 430 ProSitePatterns Protein kinases ATP-binding region signature. 95 118 IPR017441 GO:0005524
Pral5250g00016 430 FunFam Serine/threonine-protein kinase PBS1 61 165 - -
Pral5250g00016 430 CDD STKc_IRAK 95 364 - -
Pral5250g00016 430 PANTHER OS07G0668900 PROTEIN 6 374 - -
Pral5250g00016 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5250g00016 Pral-Chr5250 106869 109544 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5250g00016 1 416 Glycoside Hydrolase AT3G07070 65.394 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pral5250g00016 Pkinase 9.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5250g00016 - - gmx:100786405 609.757