Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5250g00015 ATGGCAGAAGTAGCGAAAGCTGAGATTGTATCCCAAACCACCATAAAGCCTTCGTCCCCAACCGCATCTCACCTTCAACACTCCAAAGTCTCTCTCCTCGATCAATTAGCTCCTCCCTTTTACGTTCCCATTGTCCTCTTCTATTCTCCTATTGATCATGATTTCACCAAAATATCTGATAGGTTGATGGCTTCTTTATCACAAGTTCTCACTCTTTACTACCCATTTTGTGGAAGACTCAAAGGGAATAAAAGCGATGCCTACGTGGATTGCAAAGATGAAGGTGTTCTGTATCTTGAGGCTAGAACTTCACTTAGGCTCTCAGACTTTCTCCAGAGTAATAATCATAATCCACAGCCCAACGAGATTAAAGCGTTTCTTCCATTAGATCCTTACAACCCAAAGCCAAAGAATAACGAGGAATATCCTTTTATAATGGAAGTTCGGGTTACTGAGTTTAGCTGCGGAAGTGTAGGGATCGGCGTGTGTATTTCACACAAGGTTTGTGATGGGGCAACTATAGCGTCATTCCTTCAAGCTTGGTCTGAAAATGCAGTGGCGGATGGAAATGACGTTTCTGATTCTCCCCCTAATATGGATGCTTTTTTGCTTTTCCCAGCAAGAGACATAGAGATGAACACGGCGAGTGGGATGATTGGTGAGAAGAATCTTTCCACTGGGAGATTTTTGTTTACGGAAAAAAGGTTGTGTGAACTAAGAGATAAATTAGTTTCTGGTGGCTGTCACTTTAAACCCACAAGAGTCGAAGCTGCGACTGCTCTCATATGGAAATCTGCCATGAAAGTTGCAGGAGGAGTTCGTCAATCAATGGTGTCACATGCGGTCAATATTCATAGCCGCATGGTACCCCCTTTGCCAGAAAACTCCATAGGTAATCTATGGCAACAAGTTGTTTCTCCATTGGTGGGAAGGGAGGCGGAACTGCAAGATTTGGCAGAGGTGGTGAGGAAAACCGTGAAGAGAATGGATGAAGAATGTATGCGGAAGCTTGAAGGAGGAGGCCGCAGTGAAGGGCTAGTTGAGGTTGTTAAATCATTGAAAGAAGTGATGTTTTTGGTGGGGACAAAAGGTGTTCCTTGTTATAGCTTTAGCAGCTGGACCAGGTTTGGCTTGTACGAAGCAAAATTTCAGCATTGCTCAGAGCTTATTCAATTTGCTTCTTTCGATCTCTAG 1194 0.4363 MAEVAKAEIVSQTTIKPSSPTASHLQHSKVSLLDQLAPPFYVPIVLFYSPIDHDFTKISDRLMASLSQVLTLYYPFCGRLKGNKSDAYVDCKDEGVLYLEARTSLRLSDFLQSNNHNPQPNEIKAFLPLDPYNPKPKNNEEYPFIMEVRVTEFSCGSVGIGVCISHKVCDGATIASFLQAWSENAVADGNDVSDSPPNMDAFLLFPARDIEMNTASGMIGEKNLSTGRFLFTEKRLCELRDKLVSGGCHFKPTRVEAATALIWKSAMKVAGGVRQSMVSHAVNIHSRMVPPLPENSIGNLWQQVVSPLVGREAELQDLAEVVRKTVKRMDEECMRKLEGGGRSEGLVEVVKSLKEVMFLVGTKGVPCYSFSSWTRFGLYEAKFQHCSELIQFASFDL 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5250g00015 397 PANTHER F21J9.9 8 383 - -
Pral5250g00015 397 Gene3D - 4 214 IPR023213 -
Pral5250g00015 397 Pfam Transferase family 6 384 - -
Pral5250g00015 397 Gene3D - 222 390 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5250g00015 Pral-Chr5250 86087 87371 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5250g00015 6 383 Monolignol Biosynthesis Gene Families AT5G48930 25.871 1.97e-22 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5250g00015 - K13065 gmx:100792323 362.459