Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5249g00009 ATGGCCTCTGAGAATCCTTTTGACGTTGCCGATCTTAACTTGGCACAAGAGCCAACTCAAGAGATAGAAAATAGGACTTTTGTTGATAAAAATAGCAAAATTCAAAAGGAAGGTGGCAGTGTTACACAAGGAGTGAGGAAAACTCTTGGTGAATCAGTTGGTGACCAAGCTGTTACAGGAGCACCTGGGTCTCCCTTTCTCAGAAAAGAATCCTCCTATTCCAATGAGGTTTCTGGTTTAGGAGGTTCAGATGATTCTCAATCTGGAAAAATTAAGTTACTATGCAGCTTTGGTGGAAAAGTATTACCAAGGCCCAGTGACGGGAAACTCAGATATGTAGGGGGAGAGACTCGCATTATATCTATCCGAAGGGATATTTCATGGCAAGGACTTGTTAAGAAGACCTTGGGTATTTGCAATCATCCTCACACAATTAAGTACCAGCTTCCAGGTGAGGATCTTGATTCTCTAATATCTGTTTCCTCTGACGAGGATCTTCAAAACATGATAGATGAGTACCATGGGCCTGAAAGGCATAAGGGATCTCAAAGACTTCGAATTTTTTTAATTCCCTTGAGTGAACCTGAAAAGGAATTGTCATTTGAAGCAAGAACTGATCAGCAGAGTAATCCTGATTACCAATATGTTGTTGCGGTGAATGGCATAGGGGACTGTAGTCCTGGAATAAATGGTTCAGGGCAGAGCTTGACAAATGAAGTTGGTCCATTGGGGACGAGTTTGAATTTTGCTCCGGACTTTCAGAAAAGATTTCCAAATACACATTCTTCTTCGGAGATCAAGGGTGGTGGTAGTGTTATACATCCAAATGGGTTTTTTAATGAATCTCAGAGTCTGCAGAGGACCTCCAATCAACATCAACATATTTCTACTACCCCATTTGACGGAGGAAATTTGAGCACAGTTTATCTGCAGTCTCAAGGTAATAGCTCATGGCAGGAAAGTGCTGCAGGTAGCTTATCCTTTATTACTGCCCAATTATCGCCTGAGACATCTAGTGTACCTGCTGATAGCAGATGCTCCCAACAAATGGCTGCAACTTTCCTATATGACAATCACCCCTGCCAACAAGCTGATGTTACTCTGCCAGAGCTGTACCACCAGAAGCTATTCAAGAATAATCCTGGCAAGGAATTTATAACGGCCTCATATGCTAATCAAAGTGACAGTTGTAATGATGAAATTTTGGGTGAAAAGTCTATGCATCAATCAGGAAATCCTCTTTCCAGCCTGGGCGAATCAGTTTGTCCACAGTCTGGATCAAATTGTATTCCTGATTCTCTAAATTGGATGCCCCATGCATTTTCTGATTCGAAGTTGCATGAGAGTGGATTAAAGTCTGGTTACTGCTCTCAAGAAGGGGTTGGTCAATTTTCCTCGTTGAACCTTTCAGTGGCTCAGTTATCTTCAATGTTATCCTCCAATGTTTCACAAAGGGACCCTGTGGAAATCCAGCATGATCCGCTTCTCATTTATCCCCAAAGACAAAGTAAGATACCAAATGTTGAGCCAGGTGAGTTGCACAGAAGGCAGGATTTTCCATTTTCTTCTCCATCTGCGGTATGTTTAGGAGTGAATGATCCTATTCAGAAGGATAGCATTTTATACAGTAGGGGGAATCCTTTAGCTCAAACTGATTTAACAGCACCTAGCTTTATAGAGCGGCAGTGTGGGGACAATACTGTGAAAACAGAAATCATGAAGAGAATGGAAGACAAAAGTTCTCTTCAGACTAACGAGAGCAATCTTTATGAGAGGGAATCACCTGCCGTTGCTATAGAGCATGTGAATGATTTGCATATTCTGGATTCTTCTCCAGCATCTAATTCAAACATTAAGATTAATCAGTTGGAGCAATCTTATGATGGTATGATTTCTGCATCCTCTTGCTTGACAGGAATTTCCCAAAACAATCTGATTGAGAAGACCCCATCAAATTTTCTTGACATGAGACACGGGACTAGTGATGGAAGAGATTGTGGTTTAACTGAAGGTTTGAATGGTGGGCTGGGATTTGATTTTTCTTGGACCAGAAAATCTAGCTTTAATGCTTCATCCCTAAAATGTGAAGGAACCTCTTCTGGCAAAACTTCTCCAAGCGATTGCTTGTTCGACCTGTCCATGGACCCGGTTTCTCGTAAACAAGCACAAGTTCAACCTTTTCACAAGGATACAGATCTCTGTAGAAATCCGACAGTAAGCTCAGCTTTTTTGTATCCTTCAGTACTTCGTGATGACCCTGGTCCTAGTTCAAATTTGCCTGTGAATGAATTACAGAACTCAAGCAAGAATACTGTGTTTAAAAGAGTATCTTCTCTCGATGAACTTGTAGCTAGTTCTAGTCAAGTGGTTGATCAGTATAGTGGTGGAACTCTTGCTTGTGAAACAAAAGCTGAAGATATCACGTTGGAGCAATCAAAAAATTTTGAAAAGTGCAACAATTTGAATAAAGTTGAGCCACTTATTGGTGTAGAAGATTTGACTGATGTTGTTCCTCCAAGTGTTGAGCCTTCATTGGTGCCCAGCCCACATATAGTGGTTGAAATTGGAAGTGATGTTGTATCCCCATCTGCAACAGAATTGGAGAGCGCTATTCCAGATTCTGAACCTGAGGATTTTAAAGATGATGAAGAAGACAAGAATGAATCCCTTACTGTTGCAATGATAGCGGAAATGGAAGCCAGCATCTATGGCTTACAGATAATTCAAAATGCCGATCTTGAAGAACTTCGGGAGTTAGGATCTGGTACTTATGGAACTGTTTATCACGGAAAATGGAGGGGAACTGATGTTGCTATAAAGAGAATTAAAAGGAGCTGCTTTTCAGGAAGATCTTCTGAGCTAGAGCGATTGACAAAAGACTTCTGGAGAGAGGCGCAAATTCTCTCAAATCTTCACCACCCCAACGTGGTTGCTTTTTATGGGGTTGTACCGGATGGAGCTGGAGGAACCTTGGCGACTGTAACTGAATATATGGTTAACGGTTCCCTTAGGCATGTCCTTGTCAAGAAGGATAGATTACTTGATCATCGTAAAAAGCTAATAATTGCCATGGATGCAGCTTTTGGAATGGAATATTTACATTCAAAGAATATTGTTCATTTTGATTTGAAATGTGACAATTTACTTGTCAATCTGAGGGACCCACAGAGACCCATATGTAAGGTTGGAGATTTTGGATTATCAAGAATTAAACGCAATACCCTGGTATCTGGGGGTGTGCGAGGAACCCTTCCTTGGATGGCACCAGAGCTGTTGAACGGCAGTAGCAACCGGGTTTCCGAGAAGGTTGATGTTTTCTCATTTGGCATCTCTATGTGGGAGATATTGACTGGGGAGGAACCTTATGCAGATATGCATTGTGGCGCTATTATCGGGGGGATTGTAAAGAACACTCTTCGACCACCAATTCCTCCCCGTTGTGACCCTGAGTGGAGGAAGCTTATGGAAGAATGTTGGTCACCTGAACCCGATAGCCGACCATCTTTTACTGAGATAACTAGTCGTCTCCGATCAATGTCTATGGCCCTCCAAGCCAAGCCTCATAATCAGTTGCGGCAGACAACAAACGGTGTTCATTCCTGA 3603 0.4194 MASENPFDVADLNLAQEPTQEIENRTFVDKNSKIQKEGGSVTQGVRKTLGESVGDQAVTGAPGSPFLRKESSYSNEVSGLGGSDDSQSGKIKLLCSFGGKVLPRPSDGKLRYVGGETRIISIRRDISWQGLVKKTLGICNHPHTIKYQLPGEDLDSLISVSSDEDLQNMIDEYHGPERHKGSQRLRIFLIPLSEPEKELSFEARTDQQSNPDYQYVVAVNGIGDCSPGINGSGQSLTNEVGPLGTSLNFAPDFQKRFPNTHSSSEIKGGGSVIHPNGFFNESQSLQRTSNQHQHISTTPFDGGNLSTVYLQSQGNSSWQESAAGSLSFITAQLSPETSSVPADSRCSQQMAATFLYDNHPCQQADVTLPELYHQKLFKNNPGKEFITASYANQSDSCNDEILGEKSMHQSGNPLSSLGESVCPQSGSNCIPDSLNWMPHAFSDSKLHESGLKSGYCSQEGVGQFSSLNLSVAQLSSMLSSNVSQRDPVEIQHDPLLIYPQRQSKIPNVEPGELHRRQDFPFSSPSAVCLGVNDPIQKDSILYSRGNPLAQTDLTAPSFIERQCGDNTVKTEIMKRMEDKSSLQTNESNLYERESPAVAIEHVNDLHILDSSPASNSNIKINQLEQSYDGMISASSCLTGISQNNLIEKTPSNFLDMRHGTSDGRDCGLTEGLNGGLGFDFSWTRKSSFNASSLKCEGTSSGKTSPSDCLFDLSMDPVSRKQAQVQPFHKDTDLCRNPTVSSAFLYPSVLRDDPGPSSNLPVNELQNSSKNTVFKRVSSLDELVASSSQVVDQYSGGTLACETKAEDITLEQSKNFEKCNNLNKVEPLIGVEDLTDVVPPSVEPSLVPSPHIVVEIGSDVVSPSATELESAIPDSEPEDFKDDEEDKNESLTVAMIAEMEASIYGLQIIQNADLEELRELGSGTYGTVYHGKWRGTDVAIKRIKRSCFSGRSSELERLTKDFWREAQILSNLHHPNVVAFYGVVPDGAGGTLATVTEYMVNGSLRHVLVKKDRLLDHRKKLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLNGSSNRVSEKVDVFSFGISMWEILTGEEPYADMHCGAIIGGIVKNTLRPPIPPRCDPEWRKLMEECWSPEPDSRPSFTEITSRLRSMSMALQAKPHNQLRQTTNGVHS 1200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5249g00009 1200 MobiDBLite consensus disorder prediction 866 885 - -
Pral5249g00009 1200 SUPERFAMILY Protein kinase-like (PK-like) 900 1175 IPR011009 -
Pral5249g00009 1200 Pfam PB1 domain 107 189 IPR000270 GO:0005515
Pral5249g00009 1200 ProSiteProfiles Protein kinase domain profile. 913 1191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5249g00009 1200 MobiDBLite consensus disorder prediction 68 85 - -
Pral5249g00009 1200 SMART serkin_6 913 1182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5249g00009 1200 SUPERFAMILY CAD & PB1 domains 106 191 - -
Pral5249g00009 1200 Gene3D Phosphorylase Kinase; domain 1 906 1000 - -
Pral5249g00009 1200 SMART PB1_new 105 192 IPR000270 GO:0005515
Pral5249g00009 1200 Gene3D Transferase(Phosphotransferase) domain 1 1001 1199 - -
Pral5249g00009 1200 Gene3D - 109 191 - -
Pral5249g00009 1200 Pfam Protein tyrosine and serine/threonine kinase 914 1176 IPR001245 GO:0004672|GO:0006468
Pral5249g00009 1200 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 906 1000 - -
Pral5249g00009 1200 CDD STKc_MAP3K-like 919 1176 - -
Pral5249g00009 1200 PRINTS Tyrosine kinase catalytic domain signature 1032 1050 IPR001245 GO:0004672|GO:0006468
Pral5249g00009 1200 PRINTS Tyrosine kinase catalytic domain signature 995 1008 IPR001245 GO:0004672|GO:0006468
Pral5249g00009 1200 PRINTS Tyrosine kinase catalytic domain signature 1103 1125 IPR001245 GO:0004672|GO:0006468
Pral5249g00009 1200 PRINTS Tyrosine kinase catalytic domain signature 1147 1169 IPR001245 GO:0004672|GO:0006468
Pral5249g00009 1200 MobiDBLite consensus disorder prediction 54 86 - -
Pral5249g00009 1200 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1001 1192 - -
Pral5249g00009 1200 CDD PB1_UP2 94 190 - -
Pral5249g00009 1200 ProSitePatterns Protein kinases ATP-binding region signature. 919 940 IPR017441 GO:0005524
Pral5249g00009 1200 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 110 192 - -
Pral5249g00009 1200 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1038 1050 IPR008271 GO:0004672|GO:0006468
Pral5249g00009 1200 PANTHER SERINE-THREONINE PROTEIN KINASE 158 1179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5249g00009 Pral-Chr5249 16839 24413 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5249g00009 88 222 MAP Kinase Kinase Kinase AT1G16270 58.519 2.38e-40 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Pral5249g00009 PK_Tyr_Ser-Thr 8e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5249g00009 - - gmx:100809991 1255.74