Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5249g00007 ATGGAGCTAAAGAAGCCGGAAATTTTGTTTGTTGCCAACCCTAGGAGGGCTCCAGGTGCGTTTACTCAATACATACATGCAGGATCAGCCAGTGGTGTTTTAAAAACAGGACAGGATGTGCATAATAACATCTCAATACAGCCAGGGAAAGAATTCTCTGCCGAGTTTGGTCATGAAGGAATTGCTGGTAGAAGAGAACCTGCTGCGCCTGATTCACTTGGAAAGCATGAAGGTAGGTTTGGTATTCACGTGGAGAGTGGCCAAGTGAGATATGAAGATCTTACTAATATTCTGGGATTGAAGAGAATGGCCTCTGAGAATCCTTTTGACGTTGCCGATCTTAACTTGGCACAAGAGCCAACTCAAGAGATAGAAAATAGGACTTTTGTTGATAAAAATAGCAAAATTCAAAAGGAAGGTGGCAGTGTTACACAAGGAGTGAGGAAAACTCTTGGTGAATCAGTTGGTGACCAAGCTGTTACAGGAGCACCTGGGTCTCCCTTTCTCAGAAAAGAATCCTCCTATTCCAATGAGGTTTCTGGTTTAGGAGGTTCAGATGATTCTCAATCTGGAAAAATTAAGTTACTATGCAGCTTTGGTGGAAAAGTATTACCAAGGCCCAGTGACGGGAAACTCAGATATGTAGGGGGAGAGACTCGCATTATATCTATCCGAAGGGATATTTCATGGCAAGGACTTGTTAAGAAGACCTTGGGTATTTGCAATCATCCTCACACAATTAAGTACCAGCTTCCAGGTGAGGATCTTGATTCTCTAATATCTGTTTCCTCTGACGAGGATCTTCAAAACATGATAGATGAGTACCATGGGCCTGAAAGGCATAAGGGATCTCAAAGACTTCGAATTTTTTTAATTCCCTTGAGTGAACCTGAAAAGGAATTGTCATTTGAAGCAAGAACTGATCAGCAGAGTAATCCTGATTACCAATATGTTGTTGCGGTGAATGGCATAGGGGACTGTAGTCCTGGAATAAATGGTTCAGGGCAGAGCTTGACAAATGAAGTTGGTCCATTGGGGACGAGTTTGAATTTTGCTCCGGACTTTCAGAAAAGATTTCCAAATACACATTCTTCTTCGGAGATCAAGGGTGGTGGTAGTGTTATACATCCAAATGGGTTTTTTAATGAATCTCAGAGTCTGCAGAGGACCTCCAATCAACATCAACATATTTCTACTACCCCATTTGACGGAGGAAATTTGAGCACAGTTTATCTGCAGTCTCAAGGTAATAGCTCATGGCAGGAAAGTGCTGCAGGTAGCTTATCCTTTATTACTGCCCAATTATCGCCTGAGACATCTAGTGTACCTGCTGATAGCAGATGCTCCCAACAAATGGCTGCAACTTTCCTATATGACAATCACCCCTGCCAACAAGCTGATGTTACTCTGCCAGAGCTGTACCACCAGAAGCTATTCAAGAATAATCCTGGCAAGGAATTTATAACGGCCTCATATGCTAATCAAAGTGACAGTTGTAATGATGAAATTTTGGGTGAAAAGTCTATGCATCAATCAGGAAATCCTCTTTCCAGCCTGGGCGAATCAGTTTGTCCACAGTCTGGATCAAATTGTATTCCTGATTCTCTAAATTGGATGCCCCATGCATTTTCTGATTCGAAGTTGCATGAGAGTGGATTAAAGTCTGGTTACTGCTCTCAAGAAGGGGTTGGTCAATTTTCCTCGTTGAACCTTTCAGTGGCTCAGTTATCTTCAATGTTATCCTCCAATGTTTCACAAAGGGACCCTGTGGAAATCCAGCATGATCCGCTTCTCATTTATCCCCAAAGACAAAGTAAGATACCAAATGTTGAGCCAGGTGAGTTGCACAGAAGGCAGGATTTTCCATTTTCTTCTCCATCTGCGGTATGTTTAGGAGTGAATGATCCTATTCAGAAGGATAGCATTTTATACAGTAGGGGGAATCCTTTAGCTCAAACTGATTTAACAGCACCTAGCTTTATAGAGCGGCAGTGTGGGGACAATACTGTGAAAACAGAAATCATGAAGAGAATGGAAGACAAAAGTTCTCTTCAGACTAACGAGAGCAATCTTTATGAGAGGGAATCACCTGCCGTTGCTATAGAGCATGTGAATGATTTGCATATTCTGGATTCTTCTCCAGCATCTAATTCAAACATTAAGATTAATCAGTTGGAGCAATCTTATGATGGTATGATTTCTGCATCCTCTTGCTTGACAGGAATTTCCCAAAACAATCTGATTGAGAAGACCCCATCAAATTTTCTTGACATGAGACACGGGACTAGTGATGGAAGAGATTGTGGTTTAACTGAAGGTTTGAATGGTGGGCTGGGATTTGATTTTTCTTGGACCAGAAAATCTAGCTTTAATGCTTCATCCCTAAAATGTGAAGGAACCTCTTCTGGCAAAACTTCTCCAAGCGATTGCTTGTTCGACCTGTCCATGGACCCGGTTTCTCGTAAACAAGCACAAGTTCAACCTTTTCACAAGGATACAGATCTCTGTAGAAATCCGACAGTAAGCTCAGCTTTTTTGTATCCTTCAGTACTTCGTGATGACCCTGGTCCTAGTTCAAATTTGCCTGTGAATGAATTACAGAACTCAAGCAAGAATACTGTGTTTAAAAGAGTATCTTCTCTCGATGAACTTGTAGCTAGTTCTAGTCAAGTGGTTGATCAGTATAGTGGTGGAACTCTTGCTTGTGAAACAAAAGCTGAAGATATCACGTTGGAGCAATCAAAAAATTTTGAAAAGTGCAACAATTTGAATAAAGTTGAGCCACTTATTGGTGTAGAAGATTTGACTGATGTTGTTCCTCCAAGTGTTGAGCCTTCATTGGTGCCCAGCCCACATATAGTGGTTGAAATTGGAAGTGATGTTGTATCCCCATCTGCAACAGAATTGGAGAGCGCTATTCCAGATTCTGAACCTGAGGATTTTAAAGATGATGAAGAAGACAAGAATGAATCCCTTACTGTTGCAATGATAGCGGAAATGGAAGCCAGCATCTATGGCTTACAGATAATTCAAAATGCCGATCTTGAAGAACTTCGGGAGTTAGGATCTGGTACTTATGGAACTGTTTATCACGGAAAATGGAGGGGAACTGATGTTGCTATAAAGAGAATTAAAAGGAGCTGCTTTTCAGGAAGATCTTCTGAGCTAGAGCGATTGACAAAAGACTTCTGGAGAGAGGCGCAAATTCTCTCAAATCTTCACCACCCCAACGTGGTTGCTTTTTATGGGGTTGTACCGGATGGAGCTGGAGGAACCTTGGCGACTGTAACTGAATATATGGTTAACGGTTCCCTTAGGCATGTCCTTGTCAAGAAGGATAGATTACTTGATCATCGTAAAAAGCTAATAATTGCCATGGATGCAGCTTTTGGAATGGAATATTTACATTCAAAGAATATTGTTCATTTTGATTTGAAATGTGACAATTTACTTGTCAATCTGAGGGACCCACAGAGACCCATATGTAAGGTTGGAGATTTTGGATTATCAAGAATTAAACGCAATACCCTGGTATCTGGGGGTGTGCGAGGAACCCTTCCTTGGATGGCACCAGAGCTGTTGAACGGCAGTAGCAACCGGGTTTCCGAGAAGGTTGATGTTTTCTCATTTGGCATCTCTATGTGGGAGATATTGACTGGGGAGGAACCTTATGCAGATATGCATTGTGGCGCTATTATCGGGGGGATTGTAAAGAACACTCTTCGACCACCAATTCCTCCCCGTTGTGACCCTGAGTGGAGGAAGCTTATGGAAGAATGTTGGTCACCTGAACCCGATAGCCGACCATCTTTTACTGAGATAACTAGTCGTCTCCGATCAATGTCTATGGCCCTCCAAGCCAAGCCTCATAATCAGTTGCGGCAGACAACAAACGGTGTTCATTCCTGA 3909 0.4211 MELKKPEILFVANPRRAPGAFTQYIHAGSASGVLKTGQDVHNNISIQPGKEFSAEFGHEGIAGRREPAAPDSLGKHEGRFGIHVESGQVRYEDLTNILGLKRMASENPFDVADLNLAQEPTQEIENRTFVDKNSKIQKEGGSVTQGVRKTLGESVGDQAVTGAPGSPFLRKESSYSNEVSGLGGSDDSQSGKIKLLCSFGGKVLPRPSDGKLRYVGGETRIISIRRDISWQGLVKKTLGICNHPHTIKYQLPGEDLDSLISVSSDEDLQNMIDEYHGPERHKGSQRLRIFLIPLSEPEKELSFEARTDQQSNPDYQYVVAVNGIGDCSPGINGSGQSLTNEVGPLGTSLNFAPDFQKRFPNTHSSSEIKGGGSVIHPNGFFNESQSLQRTSNQHQHISTTPFDGGNLSTVYLQSQGNSSWQESAAGSLSFITAQLSPETSSVPADSRCSQQMAATFLYDNHPCQQADVTLPELYHQKLFKNNPGKEFITASYANQSDSCNDEILGEKSMHQSGNPLSSLGESVCPQSGSNCIPDSLNWMPHAFSDSKLHESGLKSGYCSQEGVGQFSSLNLSVAQLSSMLSSNVSQRDPVEIQHDPLLIYPQRQSKIPNVEPGELHRRQDFPFSSPSAVCLGVNDPIQKDSILYSRGNPLAQTDLTAPSFIERQCGDNTVKTEIMKRMEDKSSLQTNESNLYERESPAVAIEHVNDLHILDSSPASNSNIKINQLEQSYDGMISASSCLTGISQNNLIEKTPSNFLDMRHGTSDGRDCGLTEGLNGGLGFDFSWTRKSSFNASSLKCEGTSSGKTSPSDCLFDLSMDPVSRKQAQVQPFHKDTDLCRNPTVSSAFLYPSVLRDDPGPSSNLPVNELQNSSKNTVFKRVSSLDELVASSSQVVDQYSGGTLACETKAEDITLEQSKNFEKCNNLNKVEPLIGVEDLTDVVPPSVEPSLVPSPHIVVEIGSDVVSPSATELESAIPDSEPEDFKDDEEDKNESLTVAMIAEMEASIYGLQIIQNADLEELRELGSGTYGTVYHGKWRGTDVAIKRIKRSCFSGRSSELERLTKDFWREAQILSNLHHPNVVAFYGVVPDGAGGTLATVTEYMVNGSLRHVLVKKDRLLDHRKKLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLNGSSNRVSEKVDVFSFGISMWEILTGEEPYADMHCGAIIGGIVKNTLRPPIPPRCDPEWRKLMEECWSPEPDSRPSFTEITSRLRSMSMALQAKPHNQLRQTTNGVHS 1302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5249g00007 1302 MobiDBLite consensus disorder prediction 170 187 - -
Pral5249g00007 1302 ProSiteProfiles Protein kinase domain profile. 1015 1293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5249g00007 1302 PANTHER SERINE-THREONINE PROTEIN KINASE 260 1281 - -
Pral5249g00007 1302 Pfam Protein tyrosine and serine/threonine kinase 1016 1278 IPR001245 GO:0004672|GO:0006468
Pral5249g00007 1302 MobiDBLite consensus disorder prediction 156 187 - -
Pral5249g00007 1302 SMART PB1_new 207 294 IPR000270 GO:0005515
Pral5249g00007 1302 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1140 1152 IPR008271 GO:0004672|GO:0006468
Pral5249g00007 1302 SUPERFAMILY Protein kinase-like (PK-like) 1002 1277 IPR011009 -
Pral5249g00007 1302 MobiDBLite consensus disorder prediction 968 987 - -
Pral5249g00007 1302 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1103 1294 - -
Pral5249g00007 1302 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1008 1102 - -
Pral5249g00007 1302 SMART serkin_6 1015 1284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5249g00007 1302 Pfam PB1 domain 209 291 IPR000270 GO:0005515
Pral5249g00007 1302 ProSitePatterns Protein kinases ATP-binding region signature. 1021 1042 IPR017441 GO:0005524
Pral5249g00007 1302 Gene3D - 211 293 - -
Pral5249g00007 1302 Gene3D Phosphorylase Kinase; domain 1 1008 1102 - -
Pral5249g00007 1302 CDD STKc_MAP3K-like 1021 1278 - -
Pral5249g00007 1302 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 212 294 - -
Pral5249g00007 1302 PRINTS Tyrosine kinase catalytic domain signature 1249 1271 IPR001245 GO:0004672|GO:0006468
Pral5249g00007 1302 PRINTS Tyrosine kinase catalytic domain signature 1205 1227 IPR001245 GO:0004672|GO:0006468
Pral5249g00007 1302 PRINTS Tyrosine kinase catalytic domain signature 1097 1110 IPR001245 GO:0004672|GO:0006468
Pral5249g00007 1302 PRINTS Tyrosine kinase catalytic domain signature 1134 1152 IPR001245 GO:0004672|GO:0006468
Pral5249g00007 1302 SUPERFAMILY CAD & PB1 domains 208 293 - -
Pral5249g00007 1302 CDD PB1_UP2 196 292 - -
Pral5249g00007 1302 Gene3D Transferase(Phosphotransferase) domain 1 1103 1301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5249g00007 Pral-Chr5249 15629 24413 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5249g00007 190 324 MAP Kinase Kinase Kinase AT1G16270 58.519 2.59e-40 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Pral5249g00007 PK_Tyr_Ser-Thr 9.2e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5249g00007 - - gmx:100790135 1330.47