Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5249g00006 ATGGAGCTAAAGAAGCCGGAAATTTTGTTTGTTGCCAACCCTAGGAGGGCTCCAGGTGCGTTTACTCAATACATACATGCAGGATCAGCCAGTGGTGTTTTAAAAACAGGACAGGATGTGCATAATAACATCTCAATACAGCCAGGGAAAGAATTCTCTGCCGAGTTTGGTCATGAAGGAATTGCTGGTAGAAGAGAACCTGCTGCGCCTGATTCACTTGGAAAGCATGAAGGTAGGTTTGGTATTCACGTGGAGAGTGGCCAAGTGAGATATGAAGATCTTACTAATATTCTGGGATTGAAGAGAATGGCCTCTGAGAATCCTTTTGACGTTGCCGATCTTAACTTGGCACAAGAGCCAACTCAAGAGATAGAAAATAGGACTTTTGTTGATAAAAATAGCAAAATTCAAAAGGAAGGTGGCAGTGTTACACAAGGAGTGAGGAAAACTCTTGGTGAATCAGTTGGTGACCAAGCTGTTACAGGAGCACCTGGGTCTCCCTTTCTCAGAAAAGAATCCTCCTATTCCAATGAGGTTTCTGGTTTAGGAGGTTCAGATGATTCTCAATCTGGAAAAATTAAGTTACTATGCAGCTTTGGTGGAAAAGTATTACCAAGGCCCAGTGACGGGAAACTCAGATATGTAGGGGGAGAGACTCGCATTATATCTATCCGAAGGGATATTTCATGGCAAGGACTTGTTAAGAAGACCTTGGGTATTTGCAATCATCCTCACACAATTAAGTACCAGCTTCCAGGTGAGGATCTTGATTCTCTAATATCTGTTTCCTCTGACGAGGATCTTCAAAACATGATAGATGAGTACCATGGGCCTGAAAGGCATAAGGGATCTCAAAGACTTCGAATTTTTTTAATTCCCTTGAGTGAACCTGAAAAGGAATTGTCATTTGAAGCAAGAACTGATCAGCAGAGTAATCCTGATTACCAATATGTTGTTGCGGTGAATGGCATAGGGGACTGTAGTCCTGGAATAAATGGTTCAGGGCAGAGCTTGACAAATGAAGTTGGTCCATTGGGGACGAGTTTGAATTTTGCTCCGGACTTTCAGAAAAGATTTCCAAATACACATTCTTCTTCGGAGATCAAGGGTGGTGGTAGTGTTATACATCCAAATGGGTTTTTTAATGAATCTCAGAGTCTGCAGAGGACCTCCAATCAACATCAACATATTTCTACTACCCCATTTGACGGAGGAAATTTGAGCACAGTTTATCTGCAGTCTCAAGGTAATAGCTCATGGCAGGAAAGTGCTGCAGGTAGCTTATCCTTTATTACTGCCCAATTATCGCCTGAGACATCTAGTGTACCTGCTGATAGCAGATGCTCCCAACAAATGGCTGCAACTTTCCTATATGACAATCACCCCTGCCAACAAGCTGATGTTACTCTGCCAGAGCTGTACCACCAGAAGCTATTCAAGAATAATCCTGGCAAGGAATTTATAACGGCCTCATATGCTAATCAAAGTGACAGTTGTAATGATGAAATTTTGGGTGAAAAGTCTATGCATCAATCAGGAAATCCTCTTTCCAGCCTGGGCGAATCAGTTTGTCCACAGTCTGGATCAAATTGTATTCCTGATTCTCTAAATTGGATGCCCCATGCATTTTCTGATTCGAAGTTGCATGAGAGTGGATTAAAGTCTGGTTACTGCTCTCAAGAAGGGGTTGGTCAATTTTCCTCGTTGAACCTTTCAGTGGCTCAGTTATCTTCAATGTTATCCTCCAATGTTTCACAAAGGGACCCTGTGGAAATCCAGCATGATCCGCTTCTCATTTATCCCCAAAGACAAAGTAAGATACCAAATGTTGAGCCAGGAATTTCCCAAAACAATCTGATTGAGAAGACCCCATCAAATTTTCTTGACATGAGACACGGGACTAGTGATGGAAGAGATTGTGGTTTAACTGAAGGTTTGAATGGTGGGCTGGGATTTGATTTTTCTTGGACCAGAAAATCTAGCTTTAATGCTTCATCCCTAAAATGTGAAGGAACCTCTTCTGGCAAAACTTCTCCAAGCGATTGCTTGTTCGACCTGTCCATGGACCCGGTTTCTCGTAAACAAGCACAAGTTCAACCTTTTCACAAGGATACAGATCTCTGTAGAAATCCGACAGTAAGCTCAGCTTTTTTGTATCCTTCAGTACTTCGTGATGACCCTGGTCCTAGTTCAAATTTGCCTGTGAATGAATTACAGAACTCAAGCAAGAATACTGTGTTTAAAAGAGTATCTTCTCTCGATGAACTTGTAGCTAGTTCTAGTCAAGTGGTTGATCAGTATAGTGGTGGAACTCTTGCTTGTGAAACAAAAGCTGAAGATATCACGTTGGAGCAATCAAAAAATTTTGAAAAGTGCAACAATTTGAATAAAGTTGAGCCACTTATTGGTGTAGAAGATTTGACTGATGTTGTTCCTCCAAGTGTTGAGCCTTCATTGGTGCCCAGCCCACATATAGTGGTTGAAATTGGAAGTGATGTTGTATCCCCATCTGCAACAGAATTGGAGAGCGCTATTCCAGATTCTGAACCTGAGGATTTTAAAGATGATGAAGAAGACAAGAATGAATCCCTTACTGTTGCAATGATAGCGGAAATGGAAGCCAGCATCTATGGCTTACAGATAATTCAAAATGCCGATCTTGAAGAACTTCGGGAGTTAGGATCTGGTACTTATGGAACTGTTTATCACGGAAAATGGAGGGGAACTGATGTTGCTATAAAGAGAATTAAAAGGAGCTGCTTTTCAGGAAGATCTTCTGAGCTAGAGCGATTGACAAAAGACTTCTGGAGAGAGGCGCAAATTCTCTCAAATCTTCACCACCCCAACGTGGTTGCTTTTTATGGGGTTGTACCGGATGGAGCTGGAGGAACCTTGGCGACTGTAACTGAATATATGGTTAACGGTTCCCTTAGGCATGTCCTTGTCAAGAAGGATAGATTACTTGATCATCGTAAAAAGCTAATAATTGCCATGGATGCAGCTTTTGGAATGGAATATTTACATTCAAAGAATATTGTTCATTTTGATTTGAAATGTGACAATTTACTTGTCAATCTGAGGGACCCACAGAGACCCATATGTAAGGTTGGAGATTTTGGATTATCAAGAATTAAACGCAATACCCTGGTATCTGGGGGTGTGCGAGGAACCCTTCCTTGGATGGCACCAGAGCTGTTGAACGGCAGTAGCAACCGGGTTTCCGAGAAGGTTGATGTTTTCTCATTTGGCATCTCTATGTGGGAGATATTGACTGGGGAGGAACCTTATGCAGATATGCATTGTGGCGCTATTATCGGGGGGATTGTAAAGAACACTCTTCGACCACCAATTCCTCCCCGTTGTGACCCTGAGTGGAGGAAGCTTATGGAAGAATGTTGGTCACCTGAACCCGATAGCCGACCATCTTTTACTGAGATAACTAGTCGTCTCCGATCAATGTCTATGGCCCTCCAAGCCAAGCCTCATAATCAGTTGCGGCAGACAACAAACGGTGTTCATTCCTGA 3525 0.4235 MELKKPEILFVANPRRAPGAFTQYIHAGSASGVLKTGQDVHNNISIQPGKEFSAEFGHEGIAGRREPAAPDSLGKHEGRFGIHVESGQVRYEDLTNILGLKRMASENPFDVADLNLAQEPTQEIENRTFVDKNSKIQKEGGSVTQGVRKTLGESVGDQAVTGAPGSPFLRKESSYSNEVSGLGGSDDSQSGKIKLLCSFGGKVLPRPSDGKLRYVGGETRIISIRRDISWQGLVKKTLGICNHPHTIKYQLPGEDLDSLISVSSDEDLQNMIDEYHGPERHKGSQRLRIFLIPLSEPEKELSFEARTDQQSNPDYQYVVAVNGIGDCSPGINGSGQSLTNEVGPLGTSLNFAPDFQKRFPNTHSSSEIKGGGSVIHPNGFFNESQSLQRTSNQHQHISTTPFDGGNLSTVYLQSQGNSSWQESAAGSLSFITAQLSPETSSVPADSRCSQQMAATFLYDNHPCQQADVTLPELYHQKLFKNNPGKEFITASYANQSDSCNDEILGEKSMHQSGNPLSSLGESVCPQSGSNCIPDSLNWMPHAFSDSKLHESGLKSGYCSQEGVGQFSSLNLSVAQLSSMLSSNVSQRDPVEIQHDPLLIYPQRQSKIPNVEPGISQNNLIEKTPSNFLDMRHGTSDGRDCGLTEGLNGGLGFDFSWTRKSSFNASSLKCEGTSSGKTSPSDCLFDLSMDPVSRKQAQVQPFHKDTDLCRNPTVSSAFLYPSVLRDDPGPSSNLPVNELQNSSKNTVFKRVSSLDELVASSSQVVDQYSGGTLACETKAEDITLEQSKNFEKCNNLNKVEPLIGVEDLTDVVPPSVEPSLVPSPHIVVEIGSDVVSPSATELESAIPDSEPEDFKDDEEDKNESLTVAMIAEMEASIYGLQIIQNADLEELRELGSGTYGTVYHGKWRGTDVAIKRIKRSCFSGRSSELERLTKDFWREAQILSNLHHPNVVAFYGVVPDGAGGTLATVTEYMVNGSLRHVLVKKDRLLDHRKKLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLNGSSNRVSEKVDVFSFGISMWEILTGEEPYADMHCGAIIGGIVKNTLRPPIPPRCDPEWRKLMEECWSPEPDSRPSFTEITSRLRSMSMALQAKPHNQLRQTTNGVHS 1174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5249g00006 1174 ProSiteProfiles Protein kinase domain profile. 887 1165 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5249g00006 1174 SUPERFAMILY Protein kinase-like (PK-like) 874 1149 IPR011009 -
Pral5249g00006 1174 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1012 1024 IPR008271 GO:0004672|GO:0006468
Pral5249g00006 1174 MobiDBLite consensus disorder prediction 170 187 - -
Pral5249g00006 1174 Gene3D - 211 293 - -
Pral5249g00006 1174 MobiDBLite consensus disorder prediction 156 187 - -
Pral5249g00006 1174 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 212 294 - -
Pral5249g00006 1174 SMART PB1_new 207 294 IPR000270 GO:0005515
Pral5249g00006 1174 Pfam Protein tyrosine and serine/threonine kinase 888 1150 IPR001245 GO:0004672|GO:0006468
Pral5249g00006 1174 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 880 974 - -
Pral5249g00006 1174 Pfam PB1 domain 209 291 IPR000270 GO:0005515
Pral5249g00006 1174 PRINTS Tyrosine kinase catalytic domain signature 1006 1024 IPR001245 GO:0004672|GO:0006468
Pral5249g00006 1174 PRINTS Tyrosine kinase catalytic domain signature 1121 1143 IPR001245 GO:0004672|GO:0006468
Pral5249g00006 1174 PRINTS Tyrosine kinase catalytic domain signature 1077 1099 IPR001245 GO:0004672|GO:0006468
Pral5249g00006 1174 PRINTS Tyrosine kinase catalytic domain signature 969 982 IPR001245 GO:0004672|GO:0006468
Pral5249g00006 1174 Gene3D Transferase(Phosphotransferase) domain 1 975 1173 - -
Pral5249g00006 1174 SMART serkin_6 887 1156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5249g00006 1174 MobiDBLite consensus disorder prediction 840 859 - -
Pral5249g00006 1174 ProSitePatterns Protein kinases ATP-binding region signature. 893 914 IPR017441 GO:0005524
Pral5249g00006 1174 Gene3D Phosphorylase Kinase; domain 1 880 974 - -
Pral5249g00006 1174 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 975 1166 - -
Pral5249g00006 1174 CDD STKc_MAP3K-like 893 1150 - -
Pral5249g00006 1174 PANTHER SERINE-THREONINE PROTEIN KINASE 259 1153 - -
Pral5249g00006 1174 SUPERFAMILY CAD & PB1 domains 208 293 - -
Pral5249g00006 1174 CDD PB1_UP2 196 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5249g00006 Pral-Chr5249 15629 24413 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5249g00006 190 324 MAP Kinase Kinase Kinase AT1G16270 58.519 2.11e-40 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Pral5249g00006 PK_Tyr_Ser-Thr 7.7e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5249g00006 - - adu:107474844 1028.85