Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5249g00005 ATGGAGCTAAAGAAGCCGGAAATTTTGTTTGTTGCCAACCCTAGGAGGGCTCCAGGTGCGTTTACTCAATACATACATGCAGGATCAGCCAGTGGTGTTTTAAAAACAGGACAGGATGTGCATAATAACATCTCAATACAGCCAGGGAAAGAATTCTCTGCCGAGTTTGGTCATGAAGGAATTGCTGGTAGAAGAGAACCTGCTGCGCCTGATTCACTTGGAAAGCATGAAGGTAGGTTTGGTATTCACGTGGAGAGTGGCCAAGTGAGATATGAAGATCTTACTAATATTCTGGGATTGAAGAGAATGGCCTCTGAGAATCCTTTTGACGTTGCCGATCTTAACTTGGCACAAGAGCCAACTCAAGAGATAGAAAATAGGACTTTTGTTGATAAAAATAGCAAAATTCAAAAGGAAGGTGGCAGTGTTACACAAGGAGTGAGGAAAACTCTTGGTGAATCAGTTGGTGACCAAGCTGTTACAGGAGCACCTGGGTCTCCCTTTCTCAGAAAAGAATCCTCCTATTCCAATGAGGTTTCTGGTTTAGGAGGTTCAGATGATTCTCAATCTGGAAAAATTAAGTTACTATGCAGCTTTGGTGGAAAAGTATTACCAAGGCCCAGTGACGGGAAACTCAGATATGTAGGGGGAGAGACTCGCATTATATCTATCCGAAGGGATATTTCATGGCAAGGACTTGTTAAGAAGACCTTGGGTATTTGCAATCATCCTCACACAATTAAGTACCAGCTTCCAGGTGAGGATCTTGATTCTCTAATATCTGTTTCCTCTGACGAGGATCTTCAAAACATGATAGATGAGTACCATGGGCCTGAAAGGCATAAGGGATCTCAAAGACTTCGAATTTTTTTAATTCCCTTGAGTGAACCTGAAAAGGAATTGTCATTTGAAGCAAGAACTGATCAGCAGAGTAATCCTGATTACCAATATGTTGTTGCGGTGAATGGCATAGGGGACTGTAGTCCTGGAATAAATGGTTCAGGGCAGAGCTTGACAAATGAAGTTGGTCCATTGGGGACGAGTTTGAATTTTGCTCCGGACTTTCAGAAAAGATTTCCAAATACACATTCTTCTTCGGAGATCAAGGGTGGTGGTAGTGTTATACATCCAAATGGGTTTTTTAATGAATCTCAGAGTCTGCAGAGGACCTCCAATCAACATCAACATATTTCTACTACCCCATTTGACGGAGGAAATTTGAGCACAGTTTATCTGCAGTCTCAAGGTAATAGCTCATGGCAGGAAAGTGCTGCAGGTAGCTTATCCTTTATTACTGCCCAATTATCGCCTGAGACATCTAGTGTACCTGCTGATAGCAGATGCTCCCAACAAATGGCTGCAACTTTCCTATATGACAATCACCCCTGCCAACAAGCTGATGTTACTCTGCCAGAGCTGTACCACCAGAAGCTATTCAAGAATAATCCTGGCAAGGAATTTATAACGGCCTCATATGCTAATCAAAGTGACAGTTGTAATGATGAAATTTTGGGTGAAAAGTCTATGCATCAATCAGGAAATCCTCTTTCCAGCCTGGGCGAATCAGTTTGTCCACAGTCTGGATCAAATTGTATTCCTGATTCTCTAAATTGGATGCCCCATGCATTTTCTGATTCGAAGTTGCATGAGAGTGGATTAAAGTCTGGTTACTGCTCTCAAGAAGGGGTTGGTCAATTTTCCTCGTTGAACCTTTCAGTGGCTCAGTTATCTTCAATGTTATCCTCCAATGTTTCACAAAGGGACCCTGTGGAAATCCAGCATGATCCGCTTCTCATTTATCCCCAAAGACAAAGTAAGATACCAAATGTTGAGCCAGAGCGGCAGTGTGGGGACAATACTGTGAAAACAGAAATCATGAAGAGAATGGAAGACAAAAGTTCTCTTCAGACTAACGAGAGCAATCTTTATGAGAGGGAATCACCTGCCGTTGCTATAGAGCATGTGAATGATTTGCATATTCTGGATTCTTCTCCAGCATCTAATTCAAACATTAAGATTAATCAGTTGGAGCAATCTTATGATGGTATGATTTCTGCATCCTCTTGCTTGACAGGAATTTCCCAAAACAATCTGATTGAGAAGACCCCATCAAATTTTCTTGACATGAGACACGGGACTAGTGATGGAAGAGATTGTGGTTTAACTGAAGGTTTGAATGGTGGGCTGGGATTTGATTTTTCTTGGACCAGAAAATCTAGCTTTAATGCTTCATCCCTAAAATGTGAAGGAACCTCTTCTGGCAAAACTTCTCCAAGCGATTGCTTGTTCGACCTGTCCATGGACCCGGTTTCTCGTAAACAAGCACAAGTTCAACCTTTTCACAAGGATACAGATCTCTGTAGAAATCCGACAGTAAGCTCAGCTTTTTTGTATCCTTCAGTACTTCGTGATGACCCTGGTCCTAGTTCAAATTTGCCTGTGAATGAATTACAGAACTCAAGCAAGAATACTGTGTTTAAAAGAGTATCTTCTCTCGATGAACTTGTAGCTAGTTCTAGTCAAGTGGTTGATCAGTATAGTGGTGGAACTCTTGCTTGTGAAACAAAAGCTGAAGATATCACGTTGGAGCAATCAAAAAATTTTGAAAAGTGCAACAATTTGAATAAAGTTGAGCCACTTATTGGTGTAGAAGATTTGACTGATGTTGTTCCTCCAAGTGTTGAGCCTTCATTGGTGCCCAGCCCACATATAGTGGTTGAAATTGGAAGTGATGTTGTATCCCCATCTGCAACAGAATTGGAGAGCGCTATTCCAGATTCTGAACCTGAGGATTTTAAAGATGATGAAGAAGACAAGAATGAATCCCTTACTGTTGCAATGATAGCGGAAATGGAAGCCAGCATCTATGGCTTACAGATAATTCAAAATGCCGATCTTGAAGAACTTCGGGAGTTAGGATCTGGTACTTATGGAACTGTTTATCACGGAAAATGGAGGGGAACTGATGTTGCTATAAAGAGAATTAAAAGGAGCTGCTTTTCAGGAAGATCTTCTGAGCTAGAGCGATTGACAAAAGACTTCTGGAGAGAGGCGCAAATTCTCTCAAATCTTCACCACCCCAACGTGGTTGCTTTTTATGGGGTTGTACCGGATGGAGCTGGAGGAACCTTGGCGACTGTAACTGAATATATGGTTAACGGTTCCCTTAGGCATGTCCTTGTCAAGAAGGATAGATTACTTGATCATCGTAAAAAGCTAATAATTGCCATGGATGCAGCTTTTGGAATGGAATATTTACATTCAAAGAATATTGTTCATTTTGATTTGAAATGTGACAATTTACTTGTCAATCTGAGGGACCCACAGAGACCCATATGTAAGGTTGGAGATTTTGGATTATCAAGAATTAAACGCAATACCCTGGTATCTGGGGGTGTGCGAGGAACCCTTCCTTGGATGGCACCAGAGCTGTTGAACGGCAGTAGCAACCGGGTTTCCGAGAAGGTTGATGTTTTCTCATTTGGCATCTCTATGTGGGAGATATTGACTGGGGAGGAACCTTATGCAGATATGCATTGTGGCGCTATTATCGGGGGGATTGTAAAGAACACTCTTCGACCACCAATTCCTCCCCGTTGTGACCCTGAGTGGAGGAAGCTTATGGAAGAATGTTGGTCACCTGAACCCGATAGCCGACCATCTTTTACTGAGATAACTAGTCGTCTCCGATCAATGTCTATGGCCCTCCAAGCCAAGCCTCATAATCAGTTGCGGCAGACAACAAACGGTGTTCATTCCTGA 3762 0.4219 MELKKPEILFVANPRRAPGAFTQYIHAGSASGVLKTGQDVHNNISIQPGKEFSAEFGHEGIAGRREPAAPDSLGKHEGRFGIHVESGQVRYEDLTNILGLKRMASENPFDVADLNLAQEPTQEIENRTFVDKNSKIQKEGGSVTQGVRKTLGESVGDQAVTGAPGSPFLRKESSYSNEVSGLGGSDDSQSGKIKLLCSFGGKVLPRPSDGKLRYVGGETRIISIRRDISWQGLVKKTLGICNHPHTIKYQLPGEDLDSLISVSSDEDLQNMIDEYHGPERHKGSQRLRIFLIPLSEPEKELSFEARTDQQSNPDYQYVVAVNGIGDCSPGINGSGQSLTNEVGPLGTSLNFAPDFQKRFPNTHSSSEIKGGGSVIHPNGFFNESQSLQRTSNQHQHISTTPFDGGNLSTVYLQSQGNSSWQESAAGSLSFITAQLSPETSSVPADSRCSQQMAATFLYDNHPCQQADVTLPELYHQKLFKNNPGKEFITASYANQSDSCNDEILGEKSMHQSGNPLSSLGESVCPQSGSNCIPDSLNWMPHAFSDSKLHESGLKSGYCSQEGVGQFSSLNLSVAQLSSMLSSNVSQRDPVEIQHDPLLIYPQRQSKIPNVEPERQCGDNTVKTEIMKRMEDKSSLQTNESNLYERESPAVAIEHVNDLHILDSSPASNSNIKINQLEQSYDGMISASSCLTGISQNNLIEKTPSNFLDMRHGTSDGRDCGLTEGLNGGLGFDFSWTRKSSFNASSLKCEGTSSGKTSPSDCLFDLSMDPVSRKQAQVQPFHKDTDLCRNPTVSSAFLYPSVLRDDPGPSSNLPVNELQNSSKNTVFKRVSSLDELVASSSQVVDQYSGGTLACETKAEDITLEQSKNFEKCNNLNKVEPLIGVEDLTDVVPPSVEPSLVPSPHIVVEIGSDVVSPSATELESAIPDSEPEDFKDDEEDKNESLTVAMIAEMEASIYGLQIIQNADLEELRELGSGTYGTVYHGKWRGTDVAIKRIKRSCFSGRSSELERLTKDFWREAQILSNLHHPNVVAFYGVVPDGAGGTLATVTEYMVNGSLRHVLVKKDRLLDHRKKLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLNGSSNRVSEKVDVFSFGISMWEILTGEEPYADMHCGAIIGGIVKNTLRPPIPPRCDPEWRKLMEECWSPEPDSRPSFTEITSRLRSMSMALQAKPHNQLRQTTNGVHS 1253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5249g00005 1253 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1054 1245 - -
Pral5249g00005 1253 MobiDBLite consensus disorder prediction 170 187 - -
Pral5249g00005 1253 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 959 1053 - -
Pral5249g00005 1253 SUPERFAMILY Protein kinase-like (PK-like) 953 1228 IPR011009 -
Pral5249g00005 1253 MobiDBLite consensus disorder prediction 156 187 - -
Pral5249g00005 1253 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 212 294 - -
Pral5249g00005 1253 SMART PB1_new 207 294 IPR000270 GO:0005515
Pral5249g00005 1253 SUPERFAMILY CAD & PB1 domains 208 293 - -
Pral5249g00005 1253 Gene3D Transferase(Phosphotransferase) domain 1 1054 1252 - -
Pral5249g00005 1253 Gene3D Phosphorylase Kinase; domain 1 959 1053 - -
Pral5249g00005 1253 ProSitePatterns Protein kinases ATP-binding region signature. 972 993 IPR017441 GO:0005524
Pral5249g00005 1253 ProSiteProfiles Protein kinase domain profile. 966 1244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5249g00005 1253 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1091 1103 IPR008271 GO:0004672|GO:0006468
Pral5249g00005 1253 CDD STKc_MAP3K-like 972 1229 - -
Pral5249g00005 1253 PRINTS Tyrosine kinase catalytic domain signature 1085 1103 IPR001245 GO:0004672|GO:0006468
Pral5249g00005 1253 PRINTS Tyrosine kinase catalytic domain signature 1156 1178 IPR001245 GO:0004672|GO:0006468
Pral5249g00005 1253 PRINTS Tyrosine kinase catalytic domain signature 1200 1222 IPR001245 GO:0004672|GO:0006468
Pral5249g00005 1253 PRINTS Tyrosine kinase catalytic domain signature 1048 1061 IPR001245 GO:0004672|GO:0006468
Pral5249g00005 1253 MobiDBLite consensus disorder prediction 919 938 - -
Pral5249g00005 1253 Gene3D - 211 293 - -
Pral5249g00005 1253 SMART serkin_6 966 1235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5249g00005 1253 CDD PB1_UP2 196 292 - -
Pral5249g00005 1253 PANTHER SERINE-THREONINE PROTEIN KINASE 259 1232 - -
Pral5249g00005 1253 Pfam PB1 domain 209 291 IPR000270 GO:0005515
Pral5249g00005 1253 Pfam Protein tyrosine and serine/threonine kinase 967 1229 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5249g00005 Pral-Chr5249 15629 24413 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5249g00005 190 324 MAP Kinase Kinase Kinase AT1G16270 58.519 2.84e-40 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Pral5249g00005 PK_Tyr_Ser-Thr 8.6e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5249g00005 - - gmx:100790135 1273.46