Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5249g00004 ATGGAGCTAAAGAAGCCGGAAATTTTGTTTGTTGCCAACCCTAGGAGGGCTCCAGGTGCGTTTACTCAATACATACATGCAGGATCAGCCAGTGGTGTTTTAAAAACAGGACAGGATGTGCATAATAACATCTCAATACAGCCAGGGAAAGAATTCTCTGCCGAGTTTGGTCATGAAGGAATTGCTGGTAGAAGAGAACCTGCTGCGCCTGATTCACTTGGAAAGCATGAAGGTAGGTTTGGTATTCACGTGGAGAGTGGCCAAGTGAGATATGAAGATCTTACTAATATTCTGGGATTGAAGAGAATGGCCTCTGAGAATCCTTTTGACGTTGCCGATCTTAACTTGGCACAAGAGCCAACTCAAGAGATAGAAAATAGGACTTTTGTTGATAAAAATAGCAAAATTCAAAAGGAAGGTGGCAGTGTTACACAAGGAGTGAGGAAAACTCTTGGTGAATCAGTTGGTGACCAAGCTGTTACAGGAGCACCTGGGTCTCCCTTTCTCAGAAAAGAATCCTCCTATTCCAATGAGGTTTCTGGTTTAGGAGGTTCAGATGATTCTCAATCTGGAAAAATTAAGTTACTATGCAGCTTTGGTGGAAAAGTATTACCAAGGCCCAGTGACGGGAAACTCAGATATGTAGGGGGAGAGACTCGCATTATATCTATCCGAAGGGATATTTCATGGCAAGGACTTGTTAAGAAGACCTTGGGTATTTGCAATCATCCTCACACAATTAAGTACCAGCTTCCAGGTGAGGATCTTGATTCTCTAATATCTGTTTCCTCTGACGAGGATCTTCAAAACATGATAGATGAGTACCATGGGCCTGAAAGGCATAAGGGATCTCAAAGACTTCGAATTTTTTTAATTCCCTTGAGTGAACCTGAAAAGGAATTGTCATTTGAAGCAAGAACTGATCAGCAGAGTAATCCTGATTACCAATATGTTGTTGCGGTGAATGGCATAGGGGACTGTAGTCCTGGAATAAATGGTTCAGGGCAGAGCTTGACAAATGAAGTTGGTCCATTGGGGACGAGTTTGAATTTTGCTCCGGACTTTCAGAAAAGATTTCCAAATACACATTCTTCTTCGGAGATCAAGGGTGGTGGTAGTGTTATACATCCAAATGGGTTTTTTAATGAATCTCAGAGTCTGCAGAGGACCTCCAATCAACATCAACATATTTCTACTACCCCATTTGACGGAGGAAATTTGAGCACAGTTTATCTGCAGTCTCAAGGTAATAGCTCATGGCAGGAAAGTGCTGCAGGTAGCTTATCCTTTATTACTGCCCAATTATCGCCTGAGACATCTAGTGTACCTGCTGATAGCAGATGCTCCCAACAAATGGCTGCAACTTTCCTATATGACAATCACCCCTGCCAACAAGCTGATGTTACTCTGCCAGAGCTGTACCACCAGAAGCTATTCAAGAATAATCCTGGCAAGGAATTTATAACGGCCTCATATGCTAATCAAAGTGACAGTTGTAATGATGAAATTTTGGGTGAAAAGTCTATGCATCAATCAGGAAATCCTCTTTCCAGCCTGGGCGAATCAGTTTGTCCACAGTCTGGATCAAATTGTATTCCTGATTCTCTAAATTGGATGCCCCATGCATTTTCTGATTCGAAGTTGCATGAGAGTGGATTAAAGTCTGGTTACTGCTCTCAAGAAGGGGTTGGTCAATTTTCCTCGTTGAACCTTTCAGTGGCTCAGTTATCTTCAATGTTATCCTCCAATGTTTCACAAAGGGACCCTGTGGAAATCCAGCATGATCCGCTTCTCATTTATCCCCAAAGACAAAGTAAGATACCAAATGTTGAGCCAGGTGAGTTGCACAGAAGGCAGGATTTTCCATTTTCTTCTCCATCTGCGGTATGTTTAGGAGTGAATGATCCTATTCAGAAGGATAGCATTTTATACAGTAGGGGGAATCCTTTAGCTCAAACTGATTTAACAGCACCTAGCTTTATAGAGCGGCAGTGTGGGGACAATACTGTGAAAACAGAAATCATGAAGAGAATGGAAGACAAAAGTTCTCTTCAGACTAACGAGAGCAATCTTTATGAGAGGGAATCACCTGCCGTTGCTATAGAGCATGTGAATGGAATTTCCCAAAACAATCTGATTGAGAAGACCCCATCAAATTTTCTTGACATGAGACACGGGACTAGTGATGGAAGAGATTGTGGTTTAACTGAAGGTTTGAATGGTGGGCTGGGATTTGATTTTTCTTGGACCAGAAAATCTAGCTTTAATGCTTCATCCCTAAAATGTGAAGGAACCTCTTCTGGCAAAACTTCTCCAAGCGATTGCTTGTTCGACCTGTCCATGGACCCGGTTTCTCGTAAACAAGCACAAGTTCAACCTTTTCACAAGGATACAGATCTCTGTAGAAATCCGACAGTAAGCTCAGCTTTTTTGTATCCTTCAGTACTTCGTGATGACCCTGGTCCTAGTTCAAATTTGCCTGTGAATGAATTACAGAACTCAAGCAAGAATACTGTGTTTAAAAGAGTATCTTCTCTCGATGAACTTGTAGCTAGTTCTAGTCAAGTGGTTGATCAGTATAGTGGTGGAACTCTTGCTTGTGAAACAAAAGCTGAAGATATCACGTTGGAGCAATCAAAAAATTTTGAAAAGTGCAACAATTTGAATAAAGTTGAGCCACTTATTGGTGTAGAAGATTTGACTGATGTTGTTCCTCCAAGTGTTGAGCCTTCATTGGTGCCCAGCCCACATATAGTGGTTGAAATTGGAAGTGATGTTGTATCCCCATCTGCAACAGAATTGGAGAGCGCTATTCCAGATTCTGAACCTGAGGATTTTAAAGATGATGAAGAAGACAAGAATGAATCCCTTACTGTTGCAATGATAGCGGAAATGGAAGCCAGCATCTATGGCTTACAGATAATTCAAAATGCCGATCTTGAAGAACTTCGGGAGTTAGGATCTGGTACTTATGGAACTGTTTATCACGGAAAATGGAGGGGAACTGATGTTGCTATAAAGAGAATTAAAAGGAGCTGCTTTTCAGGAAGATCTTCTGAGCTAGAGCGATTGACAAAAGACTTCTGGAGAGAGGCGCAAATTCTCTCAAATCTTCACCACCCCAACGTGGTTGCTTTTTATGGGGTTGTACCGGATGGAGCTGGAGGAACCTTGGCGACTGTAACTGAATATATGGTTAACGGTTCCCTTAGGCATGTCCTTGTCAAGAAGGATAGATTACTTGATCATCGTAAAAAGCTAATAATTGCCATGGATGCAGCTTTTGGAATGGAATATTTACATTCAAAGAATATTGTTCATTTTGATTTGAAATGTGACAATTTACTTGTCAATCTGAGGGACCCACAGAGACCCATATGTAAGGTTGGAGATTTTGGATTATCAAGAATTAAACGCAATACCCTGGTATCTGGGGGTGTGCGAGGAACCCTTCCTTGGATGGCACCAGAGCTGTTGAACGGCAGTAGCAACCGGGTTTCCGAGAAGGTTGATGTTTTCTCATTTGGCATCTCTATGTGGGAGATATTGACTGGGGAGGAACCTTATGCAGATATGCATTGTGGCGCTATTATCGGGGGGATTGTAAAGAACACTCTTCGACCACCAATTCCTCCCCGTTGTGACCCTGAGTGGAGGAAGCTTATGGAAGAATGTTGGTCACCTGAACCCGATAGCCGACCATCTTTTACTGAGATAACTAGTCGTCTCCGATCAATGTCTATGGCCCTCCAAGCCAAGCCTCATAATCAGTTGCGGCAGACAACAAACGGTGTTCATTCCTGA 3804 0.423 MELKKPEILFVANPRRAPGAFTQYIHAGSASGVLKTGQDVHNNISIQPGKEFSAEFGHEGIAGRREPAAPDSLGKHEGRFGIHVESGQVRYEDLTNILGLKRMASENPFDVADLNLAQEPTQEIENRTFVDKNSKIQKEGGSVTQGVRKTLGESVGDQAVTGAPGSPFLRKESSYSNEVSGLGGSDDSQSGKIKLLCSFGGKVLPRPSDGKLRYVGGETRIISIRRDISWQGLVKKTLGICNHPHTIKYQLPGEDLDSLISVSSDEDLQNMIDEYHGPERHKGSQRLRIFLIPLSEPEKELSFEARTDQQSNPDYQYVVAVNGIGDCSPGINGSGQSLTNEVGPLGTSLNFAPDFQKRFPNTHSSSEIKGGGSVIHPNGFFNESQSLQRTSNQHQHISTTPFDGGNLSTVYLQSQGNSSWQESAAGSLSFITAQLSPETSSVPADSRCSQQMAATFLYDNHPCQQADVTLPELYHQKLFKNNPGKEFITASYANQSDSCNDEILGEKSMHQSGNPLSSLGESVCPQSGSNCIPDSLNWMPHAFSDSKLHESGLKSGYCSQEGVGQFSSLNLSVAQLSSMLSSNVSQRDPVEIQHDPLLIYPQRQSKIPNVEPGELHRRQDFPFSSPSAVCLGVNDPIQKDSILYSRGNPLAQTDLTAPSFIERQCGDNTVKTEIMKRMEDKSSLQTNESNLYERESPAVAIEHVNGISQNNLIEKTPSNFLDMRHGTSDGRDCGLTEGLNGGLGFDFSWTRKSSFNASSLKCEGTSSGKTSPSDCLFDLSMDPVSRKQAQVQPFHKDTDLCRNPTVSSAFLYPSVLRDDPGPSSNLPVNELQNSSKNTVFKRVSSLDELVASSSQVVDQYSGGTLACETKAEDITLEQSKNFEKCNNLNKVEPLIGVEDLTDVVPPSVEPSLVPSPHIVVEIGSDVVSPSATELESAIPDSEPEDFKDDEEDKNESLTVAMIAEMEASIYGLQIIQNADLEELRELGSGTYGTVYHGKWRGTDVAIKRIKRSCFSGRSSELERLTKDFWREAQILSNLHHPNVVAFYGVVPDGAGGTLATVTEYMVNGSLRHVLVKKDRLLDHRKKLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLNGSSNRVSEKVDVFSFGISMWEILTGEEPYADMHCGAIIGGIVKNTLRPPIPPRCDPEWRKLMEECWSPEPDSRPSFTEITSRLRSMSMALQAKPHNQLRQTTNGVHS 1267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5249g00004 1267 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 973 1067 - -
Pral5249g00004 1267 MobiDBLite consensus disorder prediction 170 187 - -
Pral5249g00004 1267 MobiDBLite consensus disorder prediction 933 952 - -
Pral5249g00004 1267 MobiDBLite consensus disorder prediction 156 187 - -
Pral5249g00004 1267 SMART PB1_new 207 294 IPR000270 GO:0005515
Pral5249g00004 1267 Pfam Protein tyrosine and serine/threonine kinase 981 1243 IPR001245 GO:0004672|GO:0006468
Pral5249g00004 1267 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1068 1259 - -
Pral5249g00004 1267 Gene3D Transferase(Phosphotransferase) domain 1 1068 1266 - -
Pral5249g00004 1267 SUPERFAMILY CAD & PB1 domains 208 293 - -
Pral5249g00004 1267 Gene3D - 211 293 - -
Pral5249g00004 1267 ProSiteProfiles Protein kinase domain profile. 980 1258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5249g00004 1267 PRINTS Tyrosine kinase catalytic domain signature 1214 1236 IPR001245 GO:0004672|GO:0006468
Pral5249g00004 1267 PRINTS Tyrosine kinase catalytic domain signature 1062 1075 IPR001245 GO:0004672|GO:0006468
Pral5249g00004 1267 PRINTS Tyrosine kinase catalytic domain signature 1099 1117 IPR001245 GO:0004672|GO:0006468
Pral5249g00004 1267 PRINTS Tyrosine kinase catalytic domain signature 1170 1192 IPR001245 GO:0004672|GO:0006468
Pral5249g00004 1267 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 212 294 - -
Pral5249g00004 1267 ProSitePatterns Protein kinases ATP-binding region signature. 986 1007 IPR017441 GO:0005524
Pral5249g00004 1267 SUPERFAMILY Protein kinase-like (PK-like) 967 1242 IPR011009 -
Pral5249g00004 1267 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1105 1117 IPR008271 GO:0004672|GO:0006468
Pral5249g00004 1267 CDD STKc_MAP3K-like 986 1243 - -
Pral5249g00004 1267 Gene3D Phosphorylase Kinase; domain 1 973 1067 - -
Pral5249g00004 1267 CDD PB1_UP2 196 292 - -
Pral5249g00004 1267 SMART serkin_6 980 1249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5249g00004 1267 Pfam PB1 domain 209 291 IPR000270 GO:0005515
Pral5249g00004 1267 PANTHER SERINE-THREONINE PROTEIN KINASE 259 1246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5249g00004 Pral-Chr5249 15629 24413 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5249g00004 190 324 MAP Kinase Kinase Kinase AT1G16270 58.519 2.52e-40 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Pral5249g00004 PK_Tyr_Ser-Thr 8.8e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5249g00004 - - gmx:100809991 1288.09