Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5246g00046 ATGGCTGCCAGTTCATTTTTCCTTAATCGACACCTCAAACTCAGCTTCTGTGTGTTCCTGTTATGTCTCAGTGGAACAGCTGTTGCTCAGTTATCCTCCACATATTACCTACTTTCATGTCCTCTTGCTCTTTCTGTCATTGAAGCCGAAGTAGTCACTGCTGTGTCCAGTGAGCCTCGCATGGGTGCTTCCTTGCTCCGTCTCCATTTCCACGACTGCTTCGTCCAAGGATGTGACGCGTCAGTATTATTGGACGACACAGCAAATTTCACGGGTGAAAAAACAGCATTTCCCAACAATAATTCTCTGAGGGGATTTGATGTTATAGACAACATAAAATATAAACTAGAGCAATTGTGTCCCGGAGTCGTCTCATGTGCTGACATTCTGGCGGTTGCTGCGAGGGACTCTGTTTATGCACTGGGTGGACCTCACTGGGAAGTGAGATTGGGAAGAAAAGACTCGACCAACGCAAGTTTTAGTGATGCTAATAAGGATTTACCAGCACCCTTCCTCAATCTCAGTAGCCTCATCACTGCTTTCGCCAACAAGGGCTTCTCTCAGCAAGAGATGGTTGCTTTGTCTGGGTCTCATACGATAGGGATGGCGGCGTGCAGGATGTTCAGGAACAGGATCTACAACGACACCAACATAGAGTCGTCGTTTCAAACGTCGGAGCAAGCAGTGTGTCCGGCGCTAGGCGGAGACGGCAACCTAGCATTTTTCGACGCCACCAATAACGGAAACTCTTTCGATAACTTGTACTACCAAAACTTGGTGAATCAGAAGGGTCTGCTGCACTCCGACCAAGAGCTCTTCAATGGAGGCGGCACAGACTCTCTTGTTCAAGATTACGCCCGGGATTCTTCTCTTTTCTTCCACGACTTTGCTGATGCCATGATTAAAATGAGTGAGCTCACTCCTCTCACTGCTCCAAATGGTCAAGTTAGGACTGATTGCAGAAAAATCAATTGA 975 0.4728 MAASSFFLNRHLKLSFCVFLLCLSGTAVAQLSSTYYLLSCPLALSVIEAEVVTAVSSEPRMGASLLRLHFHDCFVQGCDASVLLDDTANFTGEKTAFPNNNSLRGFDVIDNIKYKLEQLCPGVVSCADILAVAARDSVYALGGPHWEVRLGRKDSTNASFSDANKDLPAPFLNLSSLITAFANKGFSQQEMVALSGSHTIGMAACRMFRNRIYNDTNIESSFQTSEQAVCPALGGDGNLAFFDATNNGNSFDNLYYQNLVNQKGLLHSDQELFNGGGTDSLVQDYARDSSLFFHDFADAMIKMSELTPLTAPNGQVRTDCRKIN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5246g00046 324 FunFam Peroxidase 34 172 - -
Pral5246g00046 324 PANTHER PEROXIDASE 72-RELATED 28 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5246g00046 324 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5246g00046 324 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5246g00046 324 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5246g00046 324 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5246g00046 324 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5246g00046 324 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5246g00046 324 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5246g00046 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5246g00046 324 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5246g00046 324 Gene3D Peroxidase, domain 2 168 303 - -
Pral5246g00046 324 CDD secretory_peroxidase 30 323 IPR033905 GO:0004601|GO:0042744
Pral5246g00046 324 Pfam Peroxidase 49 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral5246g00046 324 FunFam Peroxidase 168 303 - -
Pral5246g00046 324 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral5246g00046 324 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral5246g00046 324 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral5246g00046 324 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral5246g00046 324 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral5246g00046 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Pral5246g00046 324 SUPERFAMILY Heme-dependent peroxidases 30 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pral5246g00046 324 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601
Pral5246g00046 324 ProSiteProfiles Plant heme peroxidase family profile. 30 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral5246g00046 324 Gene3D - 34 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5246g00046 Pral-Chr5246 338747 340174 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5246g00046 29 324 Peroxidase AT5G05340 57.718 3.13e-125 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5246g00046 K00430 - vvi:100263665 423.32