Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5246g00045 ATGGCTAATCCTCATCTTCGCGCTCTACTACGGTGGCGCAAGTGGGCCAAGAAGGACTGGGCGATAGCCGCCGTGGGCTTCACTCTCATTGTCGTCTTTGCACTTTCTCTCATCTCCGATTCCCGGCGAAGGGTGAATGGTTCCGTAACCAACCCCTCGTTCGGTCTAAGCCAAAATGATGATCTCGTCGATCTGACCCTTCTTCGAAATGCTAAGGATAGAGGCGCTTTTTGCTTGGATGGGAGCTTGCCAGGATACCATTTCCAAAAGGGGTTTGGATCCGGCTCTAACAATTGGCTACTTCACATTGAGGGAGGAGGTTGGTGTAATACGATGTCTTCGTGTTCTCAGCGAAAAATGACTGCTTTGGGATCCTCAAAATATATGGATAGACAAATTCGTTTCTCGGGAATCTTAAGCTCTGACCCTGCGCAGAATCCTGATTTCTTTAGCTGGAACAAGGTTAAGATACGTTATTGTGATGGTGCGTCCCTCGCTGGTCATCCAGAAAACGAGATTATGAAAGGAAATAAATTATTCTTCAGAGGTCAGCTCATATGGGAAGCACTTATTGATGAACTCTTGTCAATTGGCCTGTCTGAAGCCAAAGAGGCTCTGCTTTCAGGATGCTCTGCTGGAGGATTGGCAACTCTAATACATTGTGATGCCTTTCGAGGACTTCTTCCAAGGGAAGCAACTGTAAAGTGTCTTGCTGATGCGAGCTTCTTCCTTGATGAGAAGGATATTCTTGGCAATAACACCATGAGATCCTTCTATCATGATGTTTTCCAGCTTCAGAGTGTTATGAAGAGCTTGCACAGGGACTGCACTACTGCTATGGAACCATCTAGGTGTTTCTTTCCAGCCGAAATTATGAAAAGGCTACAGACTCCTGTGTTCCTAGTCCAGCCGGCTTATGACTTCTGGCAGATACAACATGTTCTGGTACCAGAAGGGTCGGATCCTCAAGGCCACTGGAAAAGATGCAGATTGAGCATTTCCAATTGTGATACTGATCAGATGGATATTCTTCAAGGTTTCCGAAATTCTTTTCTGAAGTCCTTGAGTGAATTCCGCCCTCGAAGGGAGGTGGGACAGTTCATAAATTCTTGTTTTACTCATTGCCAGACTTGGATGTCTGAGACGTGGCATTCAGCCAGTTCTCCTAAAATAAACAAGAAGACCATAGCTGTAGCGGTTGCTGACTGGTTTTTTGACAGAGAAGTGGTGAAACAAATCGACTGCCCATATCCATGCAATCCCACTTGCCATAATATGGATTTCACTGCAATATACTAA 1299 0.455 MANPHLRALLRWRKWAKKDWAIAAVGFTLIVVFALSLISDSRRRVNGSVTNPSFGLSQNDDLVDLTLLRNAKDRGAFCLDGSLPGYHFQKGFGSGSNNWLLHIEGGGWCNTMSSCSQRKMTALGSSKYMDRQIRFSGILSSDPAQNPDFFSWNKVKIRYCDGASLAGHPENEIMKGNKLFFRGQLIWEALIDELLSIGLSEAKEALLSGCSAGGLATLIHCDAFRGLLPREATVKCLADASFFLDEKDILGNNTMRSFYHDVFQLQSVMKSLHRDCTTAMEPSRCFFPAEIMKRLQTPVFLVQPAYDFWQIQHVLVPEGSDPQGHWKRCRLSISNCDTDQMDILQGFRNSFLKSLSEFRPRREVGQFINSCFTHCQTWMSETWHSASSPKINKKTIAVAVADWFFDREVVKQIDCPYPCNPTCHNMDFTAIY 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5246g00045 432 Pfam Pectinacetylesterase 57 409 IPR004963 GO:0016787
Pral5246g00045 432 PANTHER NOTUM-RELATED 35 426 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5246g00045 Pral-Chr5246 325150 330013 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5246g00045 1 395 Carbohydrate Esterase AT3G09410 58.500 2.02e-178 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5246g00045 K19882 - qsa:O6P43_026533 680.633