Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5246g00043 ATGGGTAACGGTTTTGGAAAAATCTGCCTATGCTCCTCCGGTGTCGGAGAAATCTCCCGCCGGTACGAAATGTTTCCCTCCAATTCCTACGAAAAGTCTCTCGGCAATTCAATCTGCTACACTCGACCGGACCCATTTCGATTATCGTCCTGCTCCAATATTTTCTCCGACGAGGATTCCGCCACGCAGATGACTTTCAGATCAATCTCCGGCGCTTCTGTGAGCGCCAACTCTTCCACCCCACCTTCCATATATCTTGCCAATTCCTCCCAGCACGGAGCTTCTGCTTTTGATGCAACGGCATCGTTTGAGTCCTCCACTTCCTTCACCTCCATGCCCCTCCATTATCATCAGCCCCGTGGCTCCTCCGTTGCAAGCTCTGGCACGGTGTCCAGCCCCTTGGACGGAAGGTTCTCTTATTCGGGTTCGGGTCCTATCGGGGGGCTTGAGCCGAGATTGAATGGGAGCTCCCTTCAAGAAGAACAACAAGAATGCACTGAATCTGTAAAATTCAAAAGGACTTTATCTGATCGCAAAAATGGGTCTTTGATAAAACCCAATAATAGTTTAAAGAAGATTTTTCGGAGAGCGATTTCGAGCGTCACACCGATTAAAGGGGTGGTTTCGATCGGAGAGTCCACTTCAGAGAAGAAGAAAAACGATGAAGATGAGATCGAAAACGATGAAGGTTGTGCAGTGCAAAGTATGAATTTTCAGTGGGCTCAAGGAAGAGCAGGGGAAGATAGAATTCATATTGTGATTTCGGAGGATGATGGTTGGGTTTTCGTTGGAATTTACGATGGATTTAACGGCCCAGATGCCACTGATTATCTTCTGAACAATCTCTTTTGGTCTGTTCACGCTGAGTTGAAGGAGCTCCTCAGTAATGGCAATTCAGAATCAGCAAATGAAGAATGTTTGAGTCATTCTGATGTGCTAACAGCACTTTCGGAGGCATTAAGGAAGGCAGAGGACGAATTTCTGAAGGATTCTGATGATACAATAACGAAGGATCCAGTGCTGGCTATGATGGGTTCTTGTGTATTGGTGGTGTTGATGAAAGGAGATGATGTTTACGTAATGAATGCTGGGGATAGTCGAGCAGTTTTAGCTCAGAGTTCAGAGCATGGTTTGAATTCTCTTCAGCTCACTGTAGATCACGGCGCGAACGTGAAAGAGGAGGTTCAGAGAATTAGGAGGGAACACCCAGACGATCCTTCTGCAGTAACTAAAGGCAGAGTGAAAGGTCACTTGAATGTCACAAGGGCTTTTGGGGCTGGTTTCCTCAAGCAGCCTAAATATAACAATGCAGTATTAGAGACATTCAGAGTGGACTATATAGGGGATTCACCCTACATCACATGCTCACCTTCTCTTAAACACCACACGCTCAGCCCTAGTGACAGATTCTTGATATTGTCCTCCGATGGACTTTACCAATACTTCACCAATGAAGAGGCAGTCTACAGAGTTGAATTTTTCATGACTTTGTATCCAGAGATAGATCCTGCACAACTTCTCATTGAAGAAGCTTTGGCCAGAGCAGCAACAAAAGCCGGTATGGATTTTCATGAGTTGCTGGAAATCCCACAAGGAGAACGACGTTTATTTCATGATGATATTTCCATTGTCATAATCTCCTTGGAGGGGAAAATATGGCGCTCATCAGCCTCGTATACACATTAA 1686 0.4555 MGNGFGKICLCSSGVGEISRRYEMFPSNSYEKSLGNSICYTRPDPFRLSSCSNIFSDEDSATQMTFRSISGASVSANSSTPPSIYLANSSQHGASAFDATASFESSTSFTSMPLHYHQPRGSSVASSGTVSSPLDGRFSYSGSGPIGGLEPRLNGSSLQEEQQECTESVKFKRTLSDRKNGSLIKPNNSLKKIFRRAISSVTPIKGVVSIGESTSEKKKNDEDEIENDEGCAVQSMNFQWAQGRAGEDRIHIVISEDDGWVFVGIYDGFNGPDATDYLLNNLFWSVHAELKELLSNGNSESANEECLSHSDVLTALSEALRKAEDEFLKDSDDTITKDPVLAMMGSCVLVVLMKGDDVYVMNAGDSRAVLAQSSEHGLNSLQLTVDHGANVKEEVQRIRREHPDDPSAVTKGRVKGHLNVTRAFGAGFLKQPKYNNAVLETFRVDYIGDSPYITCSPSLKHHTLSPSDRFLILSSDGLYQYFTNEEAVYRVEFFMTLYPEIDPAQLLIEEALARAATKAGMDFHELLEIPQGERRLFHDDISIVIISLEGKIWRSSASYTH 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5246g00043 561 MobiDBLite consensus disorder prediction 144 164 - -
Pral5246g00043 561 Gene3D - 209 556 IPR036457 -
Pral5246g00043 561 Pfam Protein phosphatase 2C 255 517 IPR001932 -
Pral5246g00043 561 SMART PP2C_4 229 546 IPR001932 -
Pral5246g00043 561 CDD PP2Cc 245 548 IPR001932 -
Pral5246g00043 561 PANTHER PROTEIN PHOSPHATASE 2C 219 546 IPR015655 GO:0004722|GO:0006470
Pral5246g00043 561 SUPERFAMILY PP2C-like 244 549 IPR036457 -
Pral5246g00043 561 ProSiteProfiles PPM-type phosphatase domain profile. 230 548 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5246g00043 Pral-Chr5246 317946 320345 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5246g00043 1 555 PP2C-type Phosphatase Gene Family AT2G28890 45.617 8.07e-176 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5246g00043 - K01102 gmx:100804061 539.65