Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5246g00029 ATGGGTGCGTGCTGGAGTAATCGGATCAAGGCCGTGAGTCCTTCAAGTACAGGATTTATTTCTAGAAGTGTCAGCAGGGATGGCTGTGACACGAGTTCAAACAGCAGGAACTCATCATCCTCCATACCCATAACTCCTCGGAGTGAGGGCGAGATCTTACAGTCTTCCAATTTGAAGAGCTTCAGCTACAGCGAACTTAAAACAGCCACAAGAAATTTTCGCCCGGATAGTATCTTAGGAGAGGGTGGGTTTGGTTCCGTTTTTAAGGGGTGGATTGATGAGCACTCCCTTGTTGCTACCAAGCCAGGGACTGGCATAGTTATTGCTGTGAAGAGACTGAACCAAGATGGTTTCCAGGGTCACAAGGAATGGCTGGCTGAAATCAACTACCTTGGTCAACTGCGTCATCCTAATCTTGTCAAACTGATAGGATACTGCTTGGAGGATGAGCATCGACTTCTAGCTTATGAATTTATGTCTAGGGGCAGTGTGGAGAATCATCTTTTCAGAAGAGGATCTCATGTTCAGCCATTCACTTGGCCTTTGCGAATGAAAATAGCTCTTGGGGCTGCCAAAGGTCTTGCATTTCTCCATAGCACAGAACCTAAAGTCATATACCGTGACTTCAAGACTTCTAATATTCTTCTTGATACGGATTATAATGCCAAACTTTCTGATTTTGGGTTGGCCAGAGATGGGCCAACAGGTGACAAGAGTCACGTCTCAACTAGAGTCATGGGTACTCATGGATATGCAGCCCCGGAATATCTTGCAACAGGCCACCTCACTGCCAAGAGTGATGTATATAGTTTTGGTGTGGTTCTCCTGGAAATGTTATCAGGAAGACGAGCCATAGACAAAAACAGGCCAACCGGAGAACATAACCTTGTAGAGTGGGCAAAACCTTATCTATCTAGTAAACGAAGGTCTTTTCGTGTCATCGATGGCCGTCTTGAAGGTCAGTACTCGCTGAGTCGGGCTCAAAGAGCATGCAACCTTGCATATCAGTGTCTTTCTCCGGAACCTAAATTCAGGCCAAACATGGACGAGGTAGTAGGAGCATTGGAGCAGCTTCAGGAATCAAAGGACATGCCAAAAAGTGCTAATAAGAAAGAGCATCAGGTACAACGCGCCAGTGCTAATCATCAACCAAACGGCTTACCTGCTTCTATGACAAATCGTGCCGGAGCTGCACCATCAAATGCTGCCTATCCCAGACCATCTGCTTCTCCCCTTTTTGCTTAA 1245 0.4627 MGACWSNRIKAVSPSSTGFISRSVSRDGCDTSSNSRNSSSSIPITPRSEGEILQSSNLKSFSYSELKTATRNFRPDSILGEGGFGSVFKGWIDEHSLVATKPGTGIVIAVKRLNQDGFQGHKEWLAEINYLGQLRHPNLVKLIGYCLEDEHRLLAYEFMSRGSVENHLFRRGSHVQPFTWPLRMKIALGAAKGLAFLHSTEPKVIYRDFKTSNILLDTDYNAKLSDFGLARDGPTGDKSHVSTRVMGTHGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAIDKNRPTGEHNLVEWAKPYLSSKRRSFRVIDGRLEGQYSLSRAQRACNLAYQCLSPEPKFRPNMDEVVGALEQLQESKDMPKSANKKEHQVQRASANHQPNGLPASMTNRAGAAPSNAAYPRPSASPLFA 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5246g00029 414 FunFam Serine/threonine-protein kinase BIK1 39 158 - -
Pral5246g00029 414 MobiDBLite consensus disorder prediction 363 377 - -
Pral5246g00029 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Pral5246g00029 414 FunFam Probable serine/threonine-protein kinase PBL8 159 375 - -
Pral5246g00029 414 MobiDBLite consensus disorder prediction 359 414 - -
Pral5246g00029 414 Gene3D Phosphorylase Kinase; domain 1 48 158 - -
Pral5246g00029 414 ProSiteProfiles Protein kinase domain profile. 73 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5246g00029 414 ProSitePatterns Protein kinases ATP-binding region signature. 79 111 IPR017441 GO:0005524
Pral5246g00029 414 Gene3D Transferase(Phosphotransferase) domain 1 159 384 - -
Pral5246g00029 414 MobiDBLite consensus disorder prediction 18 48 - -
Pral5246g00029 414 PANTHER OS01G0588500 PROTEIN-RELATED 34 359 - -
Pral5246g00029 414 SUPERFAMILY Protein kinase-like (PK-like) 38 354 IPR011009 -
Pral5246g00029 414 Pfam Protein kinase domain 76 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5246g00029 414 CDD STKc_IRAK 79 358 - -
Pral5246g00029 414 MobiDBLite consensus disorder prediction 378 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5246g00029 Pral-Chr5246 202988 206360 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5246g00029 51 363 Glycoside Hydrolase AT3G07070 50.637 8.48e-107 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pral5246g00029 Pkinase 1.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5246g00029 - - gmx:100795058 649.047