Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5246g00022 ATGGTGTTGCAGAAGAATTTGAACTACAGTTTTAATGGCTATCAAGTGCCTGTCGTTCCCAGGGCTTTGAGAACAACTAGGGGGAGGGGCACATTCAAGAAGAAGAGTGAGGGCAATCAGATACAAGCTTTTGAAATTTTGGCTAGTGTAGCTGGCAACTTTCTGCAGGAGAATGAAAATTTGAATACTGAGAATGCTGTGGCTGGAAAGGATCCTGTTGGTTTTGTTGAACTTAACATAAAGGATAAACAAGAGGACGAAGCGGGGTCTTTTAAGAGTGACCTCTTGGAGCATGGATGTTGCAGTGAGAATGCCTCTGGCTCGGTCTCTAGTTTGCAAGGGAAGCATAATGACCAAAGGGTTGAAGGCTGTTCATCTTTTCTTGGCAGTCGTCTTGAAGGCCAAGGACAAAATGTTTTTGAGAAGGAAGCAGATGGACTGATGAAAGAGAATTGTGTGAATGAGAAAATTGTTCATGTTACTGGCAGCTCTGCTGGAGTGACAGAACCTCACCACAGGGCTTCTAAATGGGAAAGTTCAGAAAATTCTGTCGAGAAACCTTCATTGGAGGATCCCGTACATGGTTCCAGTGGTAGGAAATTATTTAATAGAGATGATGACGAAAAATTTGTTAGGTGTACTCAACCAAGCTCTAAGAGTAAGAATTCTGGCCTCCTGCCAGATATGGCTTTTCAGAGAATGAATTGTGTTTCTGGATCCAAAAGTCGTGGTTTAGGCCAAAAGTCAAAGAATGGGAGTTTGTATGGAAGTGATGACAGTATTGGTAGAGATAATTATATGCTTGAAAGCTCACAGAGGATGTATCCTTTTAAGAAGAGGAAGTTTTTCAACCAGACCTCATCATCTGCATCTGATAGGGGGTCTCATTGCCATGGCATATTTGATTCCTCTGACACCAGAGTTGATGATGTGAACTGCAGTGCAGCAATTGGAGCATCATCCTCTATAGCTGGTCAAGAAGTACATACGGGGTCAAGGGATTGTAATGTGAAGCTTAGCATAAAATCTTTTAAAGTCCCAGAGCTTTTTATTGATATCCCTGAAACTGCAACCATTGGTTCATTAAAGAGGACAGTTATGGAGGCAGTGACGGCTATTTTAGGAGATGAACTACATGTAGGTATTCTTCTTCAAGGAAAGAAGGTCCAAGATGACAGCAAAACTCTAATTCAGACTGGGATTTCTCAAGATGATAAACATCATAGACTGGGGTTCATGTTGGAGCCAAGACATGCTAAAATTACATCACCTTCATATAATGAAGACCGTTCTTTCCGAACCACTAGTTTGCACCGGGATATATACAGGAAACCTACATCTTTGGTGCTACAACAAAGAACTTATAACGTCTCCCAAGAGCACTCCCTGATTAAATTTGAAAGTTGTGGTGAAGGTGACCTAAACGTGGTCCCCTCTCTAGCAGATGCTTCCCCTAACAATAACATGTCAAAGTGCCGTGCCCTAGTTGCAGTTCCGGCTATTAACATGGAGGCATTAGCTGTCATTCCCTTCCGTCGTAAGCCTGGAAACCCTGACTTTGTGCAGCGTCGAATCAGGAGGCCTTTCTCCGTGTCTGAAGTAGAAGCATTGGTTCAGGCAGTTGAAAAACTAGGAACTGGAAGATGGCGTGATGTCAAACAGTGTGCCTTTGACAATGCAAAACACAGGACGTACGTGGATTTGAAGGATAAGTGGAAGACATTAGTGCACACGGCAAGAATCTCCCCTCAGCAGAGGAGAGGAGAACCTGTTCCCCAGGAGCTCTTGGACAGAGTCTTAGCTGCTCATGCCTATTGGTCTCAACAACAATGTAAGCATCAAGTTAAGCCTGTTTGA 1857 0.4324 MVLQKNLNYSFNGYQVPVVPRALRTTRGRGTFKKKSEGNQIQAFEILASVAGNFLQENENLNTENAVAGKDPVGFVELNIKDKQEDEAGSFKSDLLEHGCCSENASGSVSSLQGKHNDQRVEGCSSFLGSRLEGQGQNVFEKEADGLMKENCVNEKIVHVTGSSAGVTEPHHRASKWESSENSVEKPSLEDPVHGSSGRKLFNRDDDEKFVRCTQPSSKSKNSGLLPDMAFQRMNCVSGSKSRGLGQKSKNGSLYGSDDSIGRDNYMLESSQRMYPFKKRKFFNQTSSSASDRGSHCHGIFDSSDTRVDDVNCSAAIGASSSIAGQEVHTGSRDCNVKLSIKSFKVPELFIDIPETATIGSLKRTVMEAVTAILGDELHVGILLQGKKVQDDSKTLIQTGISQDDKHHRLGFMLEPRHAKITSPSYNEDRSFRTTSLHRDIYRKPTSLVLQQRTYNVSQEHSLIKFESCGEGDLNVVPSLADASPNNNMSKCRALVAVPAINMEALAVIPFRRKPGNPDFVQRRIRRPFSVSEVEALVQAVEKLGTGRWRDVKQCAFDNAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQQQCKHQVKPV 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5246g00022 618 MobiDBLite consensus disorder prediction 171 188 - -
Pral5246g00022 618 SMART sant 525 578 IPR001005 -
Pral5246g00022 618 MobiDBLite consensus disorder prediction 163 201 - -
Pral5246g00022 618 SUPERFAMILY Homeodomain-like 527 608 IPR009057 -
Pral5246g00022 618 SUPERFAMILY Ubiquitin-like 332 416 IPR029071 -
Pral5246g00022 618 Pfam Myb-like DNA-binding domain 526 575 IPR001005 -
Pral5246g00022 618 Gene3D - 517 618 - -
Pral5246g00022 618 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 615 IPR031105 -
Pral5246g00022 618 CDD SANT_TRF 527 577 - -
Pral5246g00022 618 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 522 580 IPR017930 -
Pral5246g00022 618 ProSiteProfiles Myb-like domain profile. 521 576 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5246g00022 Pral-Chr5246 143512 148504 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral5246g00022 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5246g00022 - - gmx:100807254 808.52