Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5246g00020 ATGGATCGGGGTCTTTGGGATTTTACCGATACCAGAAGGGAACAGCAACTGGGGAATCGATCTGTACCGATTCTGCAGCAGAATCAGAGTTTTGAAAAGGCTTTCTTTGATCACAGAAGGGAATTTCATTGCCTGCAATCTGATCAATTACCAACCAATACACCTTCTTCCTCTACCGTGACCAACGACAACGAGGAGCAATCTCCGGAAGATTGTGATTTTTCTGATAATCTGAAAAAATCATTCTATGAAGCACTGGGCGAAAAATATCCACCTTCACCTGCACAAAACCATCCAAGTCATATGATCAATGAAAATGATGGAGGCATGGGAAATGATTTCCCCAGAAATTACAGTGATTATCACAGTAATAACTATGGTAATTTCAACGGAACTTTCATTCGTCAGTCCTTGTCTCAAAGTCCTAATGAGTTGCCCTTGCAACGTATCCGAGGTAATGGTATTTCTCAGCCATCTTACAGCTCTTCAAGCAGTGCTGTAAGCGGTGTGGAAGGGCCTGTGGATTCTCCAAGCAGTATACTTCAGGTTCCGGATCCGAACAGCGAGAGCCAATCGATTTCACAATTTAAAAAAGGTGTTGAGGAGGCTAGTAGGTTTCTTCCAAATGGAAACAAGCTGTTTGCTGATTTAGGTGTGTCTAATTTATCACCAGAAGAACCAAAAACAAGAACTCATGAGATATCAGCCAAGGTGGAGAAAGATGGAGGGGATGATATTCATGGTGGGTCAAAGGTAAGAAAGCAGCCGCACAGGGGAGAGAAACATGATGAAGAAAAGAGTAGCAAGCAAGCAGCAGTTTATACAGAACCAACACTACGTTCTGTGATGTTTGATCTGGTGCTTCTTCATACTGATGGGGAAGGTAAGAACCATTACACTGCTCGTCGTGAAGCTTTGCAGAACAAGACCATGACAGCAGTGATGGCAAATGGTCAGGCAAAAACTCCAAAGTCTGGGAGGGGGCGTGGGAAGAAACAAAATGGGAGAAAAGCAGTGGTGGATTTGAGAACACTTCTGATTCTGTGTGCACAAGCTGTTGCAGCAGATGATCATAAGAATGCACAGGAGTTGCTAAAGCAGATCAGGCAGCACTCAAATCCTTTTGGGGACGGAAATCAAAGGTTGGCACATGTGTTTGCTGATGGGCTCGATGCACGCCTGGCCGGCATCGGTAGCCAGATTTATAAAGGACTCATCAATAAGAAAAGGTCAGCCGCTGATCTACTGAAAGCCTATCATCTCTACCTTGCCGCATGCCCTTTTCTGAAGATATCTAAGATTTTCTCAAATGTCACAATAAGGACAGCTTCCGAGAATTCACCGAGGGTCCATATTATAGATTTTGGTATTCTTTACGGTTTCCAGTGGCCAACTTTCATAGAGAGACTGGTAGTAAGAACAGGAGGACGACCACCAAAAATTCGAATAACAGGAATAGAATTCCCACAACCCGGTTTTAGGCCAGCCGAGAGAATAGAAGAAACAGGAAGACGGTTAGCAGATTATGCAAAATCTTTCAATGTTCAATTTGAGTATGTTGCCATAGCAAAGAAATGGGAAACTATCAAGCTTGAGGAACTCAAGATTGATAGGGACGAGTTCCTGGTTGTTAACTGTTTATACAGAGCAAAGAACTTGCTAGATGAATCTGTGTCAGTGGAGAGTCCCAGGAATGCTTTCCTGAATCTGATAAGAAAGATCAATCCTGATATATTCATTCACGGCATCATCAACGGGGCCTTCAACGCGCCTTTCTTTGTCACCAGGTTTAGGGAAGCTTTGTTTCACTACTCATCACTGTTTGATATGCTGGAGACAATCGTGCCACGAGAGGACTGGGAGAGAATGCTGATCGAGAAGGAGATATTCGGGAGAGAAGCTTTGAACGTGATAGCGTGCGAGGGATGCGAGAGATCAGAGAGACCGGAGACATATAAGCAGTGGCAGGCTCGTATTCTGAGAGCAGGGTTTACACAGATTCCTTTTGCTCGAGATCTAGTGCGGAGGGCGATGGATAAAGTAAAGGGTAGCTACCACAAGGATTTTGTCATCGATGAAGACAGCAAGTGGGTGTTACAGGGTTGGAAGGGACGAATCATCTATGCACTTTCTTGTTGGAGGCCTTCCTGA 2151 0.443 MDRGLWDFTDTRREQQLGNRSVPILQQNQSFEKAFFDHRREFHCLQSDQLPTNTPSSSTVTNDNEEQSPEDCDFSDNLKKSFYEALGEKYPPSPAQNHPSHMINENDGGMGNDFPRNYSDYHSNNYGNFNGTFIRQSLSQSPNELPLQRIRGNGISQPSYSSSSSAVSGVEGPVDSPSSILQVPDPNSESQSISQFKKGVEEASRFLPNGNKLFADLGVSNLSPEEPKTRTHEISAKVEKDGGDDIHGGSKVRKQPHRGEKHDEEKSSKQAAVYTEPTLRSVMFDLVLLHTDGEGKNHYTARREALQNKTMTAVMANGQAKTPKSGRGRGKKQNGRKAVVDLRTLLILCAQAVAADDHKNAQELLKQIRQHSNPFGDGNQRLAHVFADGLDARLAGIGSQIYKGLINKKRSAADLLKAYHLYLAACPFLKISKIFSNVTIRTASENSPRVHIIDFGILYGFQWPTFIERLVVRTGGRPPKIRITGIEFPQPGFRPAERIEETGRRLADYAKSFNVQFEYVAIAKKWETIKLEELKIDRDEFLVVNCLYRAKNLLDESVSVESPRNAFLNLIRKINPDIFIHGIINGAFNAPFFVTRFREALFHYSSLFDMLETIVPREDWERMLIEKEIFGREALNVIACEGCERSERPETYKQWQARILRAGFTQIPFARDLVRRAMDKVKGSYHKDFVIDEDSKWVLQGWKGRIIYALSCWRPS 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5246g00020 716 MobiDBLite consensus disorder prediction 148 194 - -
Pral5246g00020 716 MobiDBLite consensus disorder prediction 180 194 - -
Pral5246g00020 716 MobiDBLite consensus disorder prediction 46 75 - -
Pral5246g00020 716 ProSiteProfiles GRAS family profile. 333 714 IPR005202 -
Pral5246g00020 716 Pfam GRAS domain family 342 714 IPR005202 -
Pral5246g00020 716 MobiDBLite consensus disorder prediction 46 65 - -
Pral5246g00020 716 MobiDBLite consensus disorder prediction 148 172 - -
Pral5246g00020 716 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 261 708 IPR005202 -
Pral5246g00020 716 MobiDBLite consensus disorder prediction 219 271 - -
Pral5246g00020 716 MobiDBLite consensus disorder prediction 226 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5246g00020 Pral-Chr5246 133145 135660 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5246g00020 79 715 GRAS Transcription Factor Family AT2G37650 50.228 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral5246g00020 GRAS 6.3e-113 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5246g00020 - - gmx:100801824 927.161