Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5246g00017 ATGACAATGGATCGGGGTCTTTGGAATTTTACCGATGCCAGAAGGGAACAGAAACCGGAGAATCGATCTGTACCGATTCTCCAGCAGAATCAGGGTTTTGAAAAGGCTTTCTTTGCTCACAGAAGGGAATTTCATTTCCTGCAATCTGATCAATTACCAACCAATACACCTTCTTCCTCTACCGTGACCAACGACAACGAGGAGCAATCTCCGGAAGATTGTGATTTTTCTGATACTGTTTTGAGTTACATAAATCAGATCCTGATGGAAGAAGACATGGAAGATAAGACGTGCATGCTTCAAGATTCTTTGGATCTTCAAGCAGCTGAAAAATCATTCTATGAAGCACTGGGCGAAAAATATCCACCTTCACCTGCACAAAACCATCCAAGTCATATGATCAATGAAAATGATGGAGGCATGGGAAATAATTTCCCCAGAAATTACAGTGATTATCACAGTAATAACTATGGTAATTTCAACGGAACTTTCATTCGTCAGTCCTTGTCTCAAAGTCCTAGTGAGTTTCCCTTGCAACGTATCCGAGGTAATGGTATTTCTCAGCCATCTTACAGCTCTTCAAGCAGTGTTGTAAGCGGTGTGGAAGGGCCTGTGGATTCTCCAAGCAGTATACTTCAGGTTCCGGATCCGAACAGCGAGAGCCAATCGATTTCACAATTTAAAAAAGGTGTTGAGGAGGCTAGTAGGTTTCTTCCAAATGGAAACAAGCTGTTTGCTGATTTAGGTGTGTTTAATTTATCACCAGAAGAACCAAAAACAAGAACTCATGAGATATCAGCCAAGGTGGAGAAAGATGGAGGGGATGATATTCATGGTGGGTCAAAGGTAAGAAGGCAGCCGCACAGGGGAGAGGAAGATGATGAAGAAAAGAGTAGCAAGCAAGCAGCAGTTTATACAGAACCAACACTACGTTCTGTGATGTTTGATCTGGTGCTTCTTCATACTGATGGGGAAGGTAAGAACCATTACACTGCTCGTCGTGAAGCTTTGCAGAACAAGACCATGACGGCAGTGATGGCAAATGGTCAGGCAAAAACTCCAAAGTCTGGGAGGGGGCGTGGGAAGAAACAAAATGGGAGAAAAGCAGTGGTGGATTTGAGAACACTTCTGATTCTGTGTGCACAAGCTGTTGCAGCAGATGATCATAAGAATGCACAGGAGTTGCTAAAGCAGATCAGGCAGCACTCAAATCCTTTTGGGGACGGAAATCAAAGGTTGGCACATGTGTTTGCTGATGGGCTCGATGCACGCCTGGCCGGCACCGGTAGCCAGATTTATAAGGGACTCATCAGTAAGAAAAGGTCAGCCGCTGATCTACTGAAAGCCTATCATCTCTACCTTGCCGCATGCCCTTTTAGGAAGATATCTAATTTTTTGTCAAATGGCACAATAAGGACAGCTTGTGCGAGTTCACCGAGGGTCCATATTATAGATTTTGGTATTCTTTACGGTTTCCAGTGGCCAACTTCCATACAGAGACTGGTAATAAGCACAGGAGGGCGACCACCAAAAATTCGAATAACAGGAATAGAATTTCCACAACCCGGTTTTAGGCCAGCCGAGAGAATAGAAGAAACAGGAAGACGGTTAGCAGATTATGCAAAATCTTTCAATGTTCAATTTGAGTATGTTGCCATAGCAAAGAAATGGGAAACTATCAAGCTTGAGGAACTCAAGATTGATAGGGACGAGTTCCTGGTTGTTAACTGTTTATACAGAGCAAAGAACTTGCTAGATGAATCTGTGTCAGTGGAGAGTCCTAGGAATGCTTTCCTGAATCTGATAAGAAAGATCAATCCTGATATATTCATTCACGGCATCATCAACGGGGCCTTCAACGCGCCTTTCTTTGTCACCAGGTTTAGGGAAGCTTTGTTTCACTACTCATCACTGTTTGATATGCTGGAGACAATCGTGCCACGAGAGGACTGGGAGAGAATGCTGATCGAGAAGGAGATATTCGGGAGAGAAGCTTTGAACGTGATAGCGTGCGAGGGATGCGAGAGATCAGAGAGACCGGAGACATATAAGCAGTGGCAGGCTCGTATTCTGAGAGCAGGGTTTACACAGATTCCTTTTGCTCGAGATCTAGTGCGGAGGGCGATGGATAAAGTAAAGGGTAGCTACCACAAGGATTTTGTCATCGATGAAGACGGCAAGTGGGTGTTACAAGGTTGGAAGGGACGAATCATCTATGCACTTTCTTGTTGGAGGCCTTCCTGA 2244 0.443 MTMDRGLWNFTDARREQKPENRSVPILQQNQGFEKAFFAHRREFHFLQSDQLPTNTPSSSTVTNDNEEQSPEDCDFSDTVLSYINQILMEEDMEDKTCMLQDSLDLQAAEKSFYEALGEKYPPSPAQNHPSHMINENDGGMGNNFPRNYSDYHSNNYGNFNGTFIRQSLSQSPSEFPLQRIRGNGISQPSYSSSSSVVSGVEGPVDSPSSILQVPDPNSESQSISQFKKGVEEASRFLPNGNKLFADLGVFNLSPEEPKTRTHEISAKVEKDGGDDIHGGSKVRRQPHRGEEDDEEKSSKQAAVYTEPTLRSVMFDLVLLHTDGEGKNHYTARREALQNKTMTAVMANGQAKTPKSGRGRGKKQNGRKAVVDLRTLLILCAQAVAADDHKNAQELLKQIRQHSNPFGDGNQRLAHVFADGLDARLAGTGSQIYKGLISKKRSAADLLKAYHLYLAACPFRKISNFLSNGTIRTACASSPRVHIIDFGILYGFQWPTSIQRLVISTGGRPPKIRITGIEFPQPGFRPAERIEETGRRLADYAKSFNVQFEYVAIAKKWETIKLEELKIDRDEFLVVNCLYRAKNLLDESVSVESPRNAFLNLIRKINPDIFIHGIINGAFNAPFFVTRFREALFHYSSLFDMLETIVPREDWERMLIEKEIFGREALNVIACEGCERSERPETYKQWQARILRAGFTQIPFARDLVRRAMDKVKGSYHKDFVIDEDGKWVLQGWKGRIIYALSCWRPS 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5246g00017 747 MobiDBLite consensus disorder prediction 175 203 - -
Pral5246g00017 747 MobiDBLite consensus disorder prediction 1 22 - -
Pral5246g00017 747 MobiDBLite consensus disorder prediction 48 75 - -
Pral5246g00017 747 MobiDBLite consensus disorder prediction 257 301 - -
Pral5246g00017 747 Pfam GRAS domain family 373 745 IPR005202 -
Pral5246g00017 747 ProSiteProfiles GRAS family profile. 364 745 IPR005202 -
Pral5246g00017 747 MobiDBLite consensus disorder prediction 175 227 - -
Pral5246g00017 747 MobiDBLite consensus disorder prediction 255 302 - -
Pral5246g00017 747 MobiDBLite consensus disorder prediction 211 227 - -
Pral5246g00017 747 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 292 739 IPR005202 -
Pral5246g00017 747 MobiDBLite consensus disorder prediction 48 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5246g00017 Pral-Chr5246 118131 126346 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5246g00017 72 746 GRAS Transcription Factor Family AT2G37650 52.367 0.0 677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral5246g00017 GRAS 3.3e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5246g00017 - - gmx:100801824 989.949