Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5246g00002 ATGGGAACCAGGCAGCAAAACAAAGTGCATTGGTTCAAGCTCTTTCACTCCCATCCCATGTCTTTTGCAAACGTAGCAATTCCCATTGCTCTCCTTTTCGCCTTTCTCTACCTTCGATATGGAGTCTTCTTCTTCCTTCCAAAACAAAAAAAACTTGATCACAGACCACCACCCCCACCGCCGGGTCCTTGCCCATTGCCCCTCATCGGAAACCTCCACATTTTGGGTGTCCTTCCTCATCGCACCCTTCAATCTTTGGCCAAAACATATGGCCCCATCATGTCCCTCAAATTGGGACAAGTCCCAGCCATTGTGATCTCTTCGTCTCAGGCTGCTGAACTTATCTTCAAGACAAATGACATCATTTTCGCTACTCGTCCAAAGACTCAAGCTTATGATTACCTCTCTTATGGCTTCAAAGGCACTGCGTTTGCTGAGTATGGCCCATACTGGCGCCATGTCAAGAAGCTGTGCACTGTGCAGCTTCTGAGTGCCCCAAAAATGGAGATGTTTGCCCCGTTGAGGAGGAAAGAGCTTTGTTCAGTGGTGAAATCGCTCCAGAAAGCCTCGTCATCGAGACAGATTGTGAATCTTAGCGAAGTTTTGCACAACCTTACGGAGAATATGGTGTTTAAGATGACATTCGGTCCTAATACTAATAAGGATAATGCCTTTAATTACAAGGAGATTGTTCAAGAGGGAATGATCCTTGCCGGTGCTTTTAACCTAGCAGATTATGTGCCTTGGTTACGACCTTTTGATCTTCAGGGATTACGAAGACGATTAAAGAAATGCAGGGAAGCAACTGACGAACTGTTGGAGAAGATAATAAAGGAGCGTGAGGAAGCACAAAAGATAGCCAAGGAGAACTGCCAAAGTTTCATAGACATACTTCTCTCTCTGATGAACCAACCCATAGGTTTGCATGATGACCAAGAAGTTGTCGTTGATCGGACTATGGTGAAGGCTATAATAATAGATATGTTTGCTGCAGCATTGGAGGCTTCTGCTGTTGTGGCTGAGTGGGCTTTAGCAGAACTCATAAAGAATCCAAGGGTGATGAAGAAGCTCCAAGATGAGATTCAAAATGTTGTGGGGATGAACAGAATGGTGGAGGAGATAGACTTGTTGAAGTTGAGTTACTTGGATTTAACAGTGAAGGAGACCTTAAGATTGCATCCCGCTGGATCTCTGATTCCTCGTGAGGCAAGGGAAGACATCATAATTAATGGTTATTACATCGAAAAAAAGACAATGGTTCTGGTGAATACATGGGGCCTAGGTCGAGACCCTAAGCTATGGTCAGATAACGCAATGACATTTTATCCGGAGAGATTCCTAAATAACGAGATGGATGTTCGAGGACATCACTTCCAACTCATACCATTTGGTTCAGGTCGAAGACGATGTCCTGGTATGCGAATGGGTCTGACCATAATTAAACTTGTTGTGGCTCAGTTGGTTCATTGCTTTGACTGGGAGCTTCCTTATGGCATTAGCCCTGAAGAGTTGGATATGAATGAGAAATTTGGGCTCACAATACCAAGAGCCAAGCACTTGCTAGCAATACCAATTTGTCGCTTATACGCTTAG 1593 0.4444 MGTRQQNKVHWFKLFHSHPMSFANVAIPIALLFAFLYLRYGVFFFLPKQKKLDHRPPPPPPGPCPLPLIGNLHILGVLPHRTLQSLAKTYGPIMSLKLGQVPAIVISSSQAAELIFKTNDIIFATRPKTQAYDYLSYGFKGTAFAEYGPYWRHVKKLCTVQLLSAPKMEMFAPLRRKELCSVVKSLQKASSSRQIVNLSEVLHNLTENMVFKMTFGPNTNKDNAFNYKEIVQEGMILAGAFNLADYVPWLRPFDLQGLRRRLKKCREATDELLEKIIKEREEAQKIAKENCQSFIDILLSLMNQPIGLHDDQEVVVDRTMVKAIIIDMFAAALEASAVVAEWALAELIKNPRVMKKLQDEIQNVVGMNRMVEEIDLLKLSYLDLTVKETLRLHPAGSLIPREAREDIIINGYYIEKKTMVLVNTWGLGRDPKLWSDNAMTFYPERFLNNEMDVRGHHFQLIPFGSGRRRCPGMRMGLTIIKLVVAQLVHCFDWELPYGISPEELDMNEKFGLTIPRAKHLLAIPICRLYA 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5246g00002 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
Pral5246g00002 530 PRINTS P450 superfamily signature 331 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5246g00002 530 PRINTS P450 superfamily signature 384 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5246g00002 530 PRINTS P450 superfamily signature 461 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5246g00002 530 Pfam Cytochrome P450 60 519 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5246g00002 530 Coils Coil 255 289 - -
Pral5246g00002 530 FunFam Cytochrome P450 83B1 46 523 - -
Pral5246g00002 530 PANTHER CYTOCHROME P450 93A3-LIKE 41 528 - -
Pral5246g00002 530 Gene3D Cytochrome P450 49 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5246g00002 530 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5246g00002 530 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5246g00002 530 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5246g00002 530 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5246g00002 530 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5246g00002 530 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5246g00002 530 SUPERFAMILY Cytochrome P450 60 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5246g00002 530 CDD CYP71-like 89 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5246g00002 Pral-Chr5246 24414 26459 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5246g00002 29 524 Cytochrome P450 AT3G26300 37.725 8.22e-118 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5246g00002 - - gmx:100782715 581.252