Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5244g00021 ATGGAAGCCACTTCTATGACGAAGTTGCTGAAGAGCTTTTGTGATCACTCACATTGGAATTATGCTGTATTTTGGAGGCTTAACTACCATTTTCCAATGACTTTGACCTGGGAAGATGGATACTATGGTGATTTGAAAACCAACGACGCTGTGGAAAGTGCGTGGACGGAGGTGGCTTCTTCAAGCTGTGAAAGTACCCATGGTTCTGAAGAGAATTCTGTTAGATTACTCATGACTGATATGTCTCGCCTGAAGTACATATTGGGAGAGGGGGTTATTGGCAAAGTAGCTCTTACGGGGGATCATTGTTGGATTTTAGTTGAAGATATTTTAACTGGTAAATTCCAGACTAAGTTGGTTGATGAGTGTCCATATGAATGGCTTCTTCAATTTGCATCAGCTATCAAGACTATTGTACTGGTACCGGTTCCTCCACATGGAGTTTTGCAATTCGGCTCATTCGAAGCGGTTGCTGAGGACCTGGCATTTGCTGCCAATGTGAAGGAGAAATTCAATTTCTTTCACTGTGTAACGGCAAATACTCCGCCTTTGAGCTCAGATGAAAATATTCAGGATTGGTCATTCTCAGCTCTGATAGATTATCCTCTGGATAATTCAGATGTATCATCTGTTACAAATAATATCCTGACACATGAACTTTTTGGTGGCAATTCACTTAATATAAATGATTTGAGGTTGAATCCAACTGCCCCATCATTTATTCCGGCTGAAGGTTCCATGTCCAGAAAAAATGAGACCAGTCCTCCATCAACTGCGGTGTCAAATGACAATGGTCATGTGGAAGTCAAATCAAACCAAATGGAAGAAGTGATAACCAGTTCTCCGTGGGTCAATAATATGGGAGCATTTGGAGAGACATCTGAGGGATTATTTTCTTGTTCTCGTAAGGATATGGCCAAACAATTTGAAGGCACTGGCACTGACCATGACGATTGTAATAAGGTCAATAGTTTCTGCGGTTTTCCGTTGGATTCTGAATTACACAAAGCACTAGGACCTATTGCTAATAGACAAACTTGTGAACCTCAGTCCGAATATTCCTCTTTTAAAGATATGTGTCGTACTAGCTCCACGTTGATAGCTCGGGAAAAAGAGCATGGTCATGTGGGTTTTCAATTTTCCGACAGACACAAATCAGAATATCTTTTGGATGCAGTTGTCCGCAATTTATGCAGTGCCTCTGATGATTCTTCATCGACGTTGCCAATAGTATTAACTACTTCCATTCATCCACAAAGTCATTCTGAGGGCAGCACTTTGATGGTAAATAATGCTGATTCAAGTAGCCACCTTACGTCGGCATTTGGGGGCAACATAGATGATTGTACTGATCTTCTTACATTGGCATCTTTGGATGACAATTCAAGCATATTGCTTGATGGGGCAAAGCAAGAATCTGTTCATGTTCATAAGCAGCCTAAGAGTGGGCCAAAACTTTCTAGTATGGGCAAGAAAAGAGGCCGTGCAGGAAATATGCCAAGGCCAAGACCAAGGGACAGGCAGTTGATTATGGACCGGATGAAGGAGCTGAGGGAACTTGTCCCAGATGGTGCCAAGTGTAGCATTGACAACCTCTTAGATCGGACCATAAAGCACATGCTGTACTTGAAAGAAATAACAAACCTGGCTGAGAAATTGAAACAATTTGAGCATAAGGAGGTGCCAGAGTTCAAGAAGCAGAAAATCAATGGCAATTATACTGGGAGGAGCTGTGCAATTGACTTTGGCAGTGAACTCCAAGTATGCCCTATAGTTATAGAAGATCTTGAATGCCCAGGCCACATGCTTATAGAGGTGATATGTAGTGAGCATGGACTTTTCTTGGAGATTGCGCAAGTGATTCGACAGTTGGAGCTTACTATATTGAAAGGTGTTTTAGAAAGCAGTGCAAGCAATGCCTGGGCCCGTTTCATTGTTAAGGTTCCCAGAGGCTTTCACAGGATGGATGTTCTATGTCCTTTGCTGCATCTTTTGCAGACTGGAAGAAGCCTTGTCTCAAGTAGAATTTGA 2031 0.4215 MEATSMTKLLKSFCDHSHWNYAVFWRLNYHFPMTLTWEDGYYGDLKTNDAVESAWTEVASSSCESTHGSEENSVRLLMTDMSRLKYILGEGVIGKVALTGDHCWILVEDILTGKFQTKLVDECPYEWLLQFASAIKTIVLVPVPPHGVLQFGSFEAVAEDLAFAANVKEKFNFFHCVTANTPPLSSDENIQDWSFSALIDYPLDNSDVSSVTNNILTHELFGGNSLNINDLRLNPTAPSFIPAEGSMSRKNETSPPSTAVSNDNGHVEVKSNQMEEVITSSPWVNNMGAFGETSEGLFSCSRKDMAKQFEGTGTDHDDCNKVNSFCGFPLDSELHKALGPIANRQTCEPQSEYSSFKDMCRTSSTLIAREKEHGHVGFQFSDRHKSEYLLDAVVRNLCSASDDSSSTLPIVLTTSIHPQSHSEGSTLMVNNADSSSHLTSAFGGNIDDCTDLLTLASLDDNSSILLDGAKQESVHVHKQPKSGPKLSSMGKKRGRAGNMPRPRPRDRQLIMDRMKELRELVPDGAKCSIDNLLDRTIKHMLYLKEITNLAEKLKQFEHKEVPEFKKQKINGNYTGRSCAIDFGSELQVCPIVIEDLECPGHMLIEVICSEHGLFLEIAQVIRQLELTILKGVLESSASNAWARFIVKVPRGFHRMDVLCPLLHLLQTGRSLVSSRI 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5244g00021 676 MobiDBLite consensus disorder prediction 246 264 - -
Pral5244g00021 676 MobiDBLite consensus disorder prediction 471 505 - -
Pral5244g00021 676 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 8 171 IPR025610 -
Pral5244g00021 676 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 248 670 IPR043561 GO:0003700|GO:0006355
Pral5244g00021 676 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 494 543 IPR011598 GO:0046983
Pral5244g00021 676 MobiDBLite consensus disorder prediction 239 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5244g00021 Pral-Chr5244 219920 225686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5244g00021 6 666 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 31.533 1.65e-77 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5244g00021 - - lang:109360470 692.96