Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5244g00019 ATGGTGCAACAGAGGGTTCCTGCAATAACCTTAATCTTCACGATGGCGGTGCTACTATCTTGTGCCGCTGGCACCCCACGGCGTTGCCGCAACTGCGGGTCAAATCCGGTTCCATACCCATTAAGCACGGGACCCGACTGTGGCCATCCGATGTACAGTATGAAGTGCACAAAAGGCAAGTTGTGGTTTGACGATCTCAGTGGATCATCTTACATGATAAAGTCCATCAATCCGGTGACTCGCCGGATCATTATACGACCCGCAAGCATCTCCCCGTGGACGTGTGTGTCCGGCGACTTCCGCAACGAAGGCATACAACTGAACAAAGCCCTTCCTTTTAAAATGACCGGCAATAATACCGTCTTTCTGTACAACTGTACGAACGCGATGCCGAGATCAAAACCACCGTTGGACTGTTCACCGAATGATCTGTGTCATAGCTACATTAAGGATCATGCAGACGGCGGCGGCGCGTGCAAAAACGCAGGGTTATGTTGCAGCTTCAGGACCGTTAAACCCTTCTCGGAGTACATGATAAGGGTGCATGAAGGAGACTGTGCTGCATATCAGAGTTTTGTAAATCTCAATGTGGCGGTGGCTCCGCCGCCGAATAGGTGGCCGGAGCTGGGAATAGAGTTGGAGTGGGAAATACCGGTGGAGCCCGTTTGCAAGGGCCCGAAGGATTGCAAGGAGCTGTTGAACTCCAAATGCTTGAAGGATCCGACCAATGCTCGGCGAATGAAGTGCCTTTGCAATGCTGGCTTCAAGTGGGACCCTAGCAATGGACTGTGTCAACTTGGTCATGATCAACCAAAAGATGTAAGCTGCCCAACGCATGGTAGAAAAGGTAGTGAACCATGCAAACCCGTAGAAGCAGCCTGCCCAAGACAAGGTAGGAAAGGTGATCCACCATGCAAACCTATAGAAGTAGCCTGCCCAAGACACGGTAGGAAAGGTGATCCACCATGCAAACCTGTAGAAGTAACGTGCCCAAGTCGTGATGGTAGAAAAGGCAAACCATGCAAACCTGGTCATCGTGAGAAGAAGAAGGCCACGCCCCTCGCTGCTGTCGGAGGTTCTTTGGGGGCAATAGTATTCATTGCACTGGTAGTGAGCATTTTTCTATACAAGAAGCATGACAAGTCAAAGAAACAAGCCGAAAGGAAGTTAACGAAGCAAAAGGAACGAATCTTAAACGCAAAAGCCAACTGTGGATTATCGGCCAGGATCTTCACAATGAGAGAGATCAAGAAGGCAACCAACAATTTCTCCAAAGACAACCTCATCAGCACCGGCGGCTTCGGCGAGGTCTTCAAAGGGACCTTCGATGACGGAACCGTCGTAGCCATTAAACGAGCCAAGCTCGGCAACACCAAAGCCCTCGACCAAATCCTCAACGAGGTTCGAATCCTCTGCCAAGTCAACCACCGTAATCTCGTCCGCCTCCTCGGTTGTTGCGTCGAACTAGACTACCAACCCCTCCTCATCTACGAATATGTCCCCAATGGGACCCTCTTCGACCACCTCCACACGCACCGTTTTGATCGTCCTCTCCAGTGGCTTCACAGGCTTAAAATCGCTCACCAAACAGCTCAAGCTCTTAACTATCTTCACTCCTCTGCATTGCCTCCTATATACCACAGGGACGTAAAATCAAGCAATATACTGTTAGATGATAAGCTTGATGCTAAAGTTTCAGACTTTGGGCTGTCTAGGCTTGTTGAGATAGCTGAGGCGGATAAGAGCCATATCTTCACCAGTGCACAGGGGACCTTAGGGTATCTTGACCCTGAGTATTATCGGAACTTTCAGCTTACTGATAAGAGTGATGTGTATAGTTTTGGGGTGGTTTTGCTGGAGATTCTGACTCGTGAGAAGGCGATTGATTTTACCAGGGAAGAGGAGAATGTGAACTTGGTGGTTTATGGGAAGAAGATGGTAAAGGAAGAGAGGTTTCTGGACATGGTGGATCCGGTGTTGATGGACGGAGCGAGCAACTTGGAGTTGGAGACGATGAAGTCCCTGGGGTTTCTGGCAGTGGCTTGCTTGGATGAGCAGAGGCATAATCGGCCTCCCATGAAGGAAGTTTCCGACGAGATTGAGTACCTTATTAGTATTCTTACCAGTGATGTCCCCAAAACGTAG 2145 0.496 MVQQRVPAITLIFTMAVLLSCAAGTPRRCRNCGSNPVPYPLSTGPDCGHPMYSMKCTKGKLWFDDLSGSSYMIKSINPVTRRIIIRPASISPWTCVSGDFRNEGIQLNKALPFKMTGNNTVFLYNCTNAMPRSKPPLDCSPNDLCHSYIKDHADGGGACKNAGLCCSFRTVKPFSEYMIRVHEGDCAAYQSFVNLNVAVAPPPNRWPELGIELEWEIPVEPVCKGPKDCKELLNSKCLKDPTNARRMKCLCNAGFKWDPSNGLCQLGHDQPKDVSCPTHGRKGSEPCKPVEAACPRQGRKGDPPCKPIEVACPRHGRKGDPPCKPVEVTCPSRDGRKGKPCKPGHREKKKATPLAAVGGSLGAIVFIALVVSIFLYKKHDKSKKQAERKLTKQKERILNAKANCGLSARIFTMREIKKATNNFSKDNLISTGGFGEVFKGTFDDGTVVAIKRAKLGNTKALDQILNEVRILCQVNHRNLVRLLGCCVELDYQPLLIYEYVPNGTLFDHLHTHRFDRPLQWLHRLKIAHQTAQALNYLHSSALPPIYHRDVKSSNILLDDKLDAKVSDFGLSRLVEIAEADKSHIFTSAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEILTREKAIDFTREEENVNLVVYGKKMVKEERFLDMVDPVLMDGASNLELETMKSLGFLAVACLDEQRHNRPPMKEVSDEIEYLISILTSDVPKT 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5244g00019 714 Gene3D Transferase(Phosphotransferase) domain 1 500 709 - -
Pral5244g00019 714 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Pral5244g00019 714 ProSitePatterns Serine/Threonine protein kinases active-site signature. 545 557 IPR008271 GO:0004672|GO:0006468
Pral5244g00019 714 CDD STKc_IRAK 429 701 - -
Pral5244g00019 714 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 395 499 - -
Pral5244g00019 714 FunFam Wall-associated receptor kinase-like 20 500 712 - -
Pral5244g00019 714 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 23 703 IPR045274 GO:0007166
Pral5244g00019 714 ProSiteProfiles Protein kinase domain profile. 423 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5244g00019 714 SMART serkin_6 423 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5244g00019 714 Gene3D Phosphorylase Kinase; domain 1 392 499 - -
Pral5244g00019 714 Pfam Protein tyrosine and serine/threonine kinase 426 659 IPR001245 GO:0004672|GO:0006468
Pral5244g00019 714 SUPERFAMILY Protein kinase-like (PK-like) 407 704 IPR011009 -
Pral5244g00019 714 Coils Coil 376 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5244g00019 Pral-Chr5244 175102 179070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5244g00019 367 714 Receptor kinase-like Gene Family AT5G02070 65.722 4.50e-157 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pral5244g00019 PK_Tyr_Ser-Thr 6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5244g00019 - - ahf:112794981 791.571