Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5244g00005 ATGGCTCAGTCGCCGGGTCGGGGCGGTTTGGTGGGAGACTACATCATCGGGAAGCAAATTGGGGCCGGGTCTTTCTCCGTGGTGTGGCATGGGAGGCACCGAGTCCATGGAACTGAGGTTGCCATTAAAGAGATCGCCACCAGTCGGCTTAACAAGAAGTTGCAGGAGAGTCTCATGTCTGAGATTTTTATCTTGAAGCGGATTGACCATCCTAATATAATTCGTTTGCATGATATAATTCAGGTTCCTGGGAAGATACATCTCGTGTTAGAGTACTGTAAAGGGGGTGATCTCTCTATGTATATACATCGCCGTGGAAGAGTCCAAGAGGGAACTGCAAAGCATTTTATGCAACAGCTAGCTGCTGGCCTACAAGTTCTTCGAGATAATAATCTTATTCATAGAGATTTGAAACCACAGAATCTTCTTCTCACCAGAAATGATGACAATTCAGTTCTGAAGATTGCTGATTTTGGATTTGCAAGATCTCTGCAACCCAAGGGTCTTGCAGAAACCTTGTGTGGTTCGCCTCTCTACATGGCTCCAGAAATTATGCAACTACAGAAGTATGACGCTAAGGCAGACCTCTGGAGTGTGGGTGCGATCTTATTTCAGCTTGTTACGGGAAGAACACCATATACTGGGAATAATCAAATACAGTTACTACAGAACATTGTGAAATCAACTGAGCTGCAGTTTCCATCTGATAATCAAAGTCTGAGTTATGAGTGTAAAGATTTATGTCAAAAATTGCTGCGACGTAGTCCAGTGGAACGGCTAACTTTTGAAGAATTTTTTAATCATCCATTTCTTTCTCAGAAGCGACCAGAACAGGACAAATCATTGAGACGTGGAAGTTCTTCAAAGATGGTAGATGAAATTTGCTTAACGGAGTCTAATCCTTTGAGGGCTAAGGAAAATCATCAAGAGGACTGCTTACCTTTCTTTTTGGATGATGATTCTTGTGGTCCTGAGGGGAGCCCAGCTTTCTCGAGGAAGAAATCCTCAATGAAGTCTACCTATGGGTTTGACCTTAATACACAGCGAGATAGAGCAGGCTCAGCATTCGCTACTTCTAATAACATAAATTTCACTTCCCGAGAGCAACCTGAAAACAGTGCTATAATGTTGGACAGCCATAGAACCTCAGCAAGAAATCTTGTTGATCCTCTAGAATCTCTAGAACAGATATTAGCAAACACTGGTTCAAGAGTTGCAGACTCACTGGAGAATATTGATCAAGATTATGTTCTTGTATCGGGACCTCCTATGGATGTCTCATCAACTTCAGTAGGTGCATCAAAGCCAAGCCATTTTCCATATAGATCAGGTGCTTCCCCACAGGAGTCTTCTAATGTAATTGATAGAGTAAGTTCTCCAGTGCCAATACTTGGTGCTGCTACCAGTAGCACATGTCAAATTGGAAGTTTAGAAAGTCAGGACTCTGCTCCAGGGACTTCACATGCATCAATGGATACAGTAGATGAGCAGCCATCAGCTGACTGCATTACCAGAATAAAATCATTACAACAGTGTGCATCCACCATAACTGAATTAGTTCATGAAAAGATGGTGGCTGGAAAGCAGTTGGAAGCATTCTCCATTCAGCTTGTTATTCTTGCAATATGGAAGCAAGCACTACACATATGTCATGCACAGGCTGCCTCTGCCATGGAAGGGAGTCCAAGTCAAGAAACCACTAGATGTAGGAGGAGCACCGACATGAAGCATGGCAGTTCCGATTCAGAAGAATGCCTTGATGGAAATGTGCTAGGACCAAAGGATATTCTATCTCAAATTGAAAGTGAATTTCTAAGGGAATTTGAGCATGCTGAAGAACTTGCTAAGGCTGTTCAGCCTGGAAATACAGAGATGCCAGATGCAATGGAGACGATATTTCAGTCTGCCCTTGCTTTTGGGAGACATGGGGGTGTAGAAGAGCTCATGGGTGAAATGGATAATGCAGCTGCACTATATTCAAAAGCTGTGCTGCTACTGATGTTCCTTCTAGTGGAAGCTCCATCCCTTATTCTTAATCCTCCATTTTCACTGACTAACACGGATCGATACAGGCTTCGGACTTACATCGATGATCTAAACAACAGGCAAGGCTATTCCAGGTCTCAGAGAATGACGCTGTTGAAATGTGACGAAGCACAAGGCGGCCTAAAGAACAAGTTTTAA 2184 0.4327 MAQSPGRGGLVGDYIIGKQIGAGSFSVVWHGRHRVHGTEVAIKEIATSRLNKKLQESLMSEIFILKRIDHPNIIRLHDIIQVPGKIHLVLEYCKGGDLSMYIHRRGRVQEGTAKHFMQQLAAGLQVLRDNNLIHRDLKPQNLLLTRNDDNSVLKIADFGFARSLQPKGLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGAILFQLVTGRTPYTGNNQIQLLQNIVKSTELQFPSDNQSLSYECKDLCQKLLRRSPVERLTFEEFFNHPFLSQKRPEQDKSLRRGSSSKMVDEICLTESNPLRAKENHQEDCLPFFLDDDSCGPEGSPAFSRKKSSMKSTYGFDLNTQRDRAGSAFATSNNINFTSREQPENSAIMLDSHRTSARNLVDPLESLEQILANTGSRVADSLENIDQDYVLVSGPPMDVSSTSVGASKPSHFPYRSGASPQESSNVIDRVSSPVPILGAATSSTCQIGSLESQDSAPGTSHASMDTVDEQPSADCITRIKSLQQCASTITELVHEKMVAGKQLEAFSIQLVILAIWKQALHICHAQAASAMEGSPSQETTRCRRSTDMKHGSSDSEECLDGNVLGPKDILSQIESEFLREFEHAEELAKAVQPGNTEMPDAMETIFQSALAFGRHGGVEELMGEMDNAAALYSKAVLLLMFLLVEAPSLILNPPFSLTNTDRYRLRTYIDDLNNRQGYSRSQRMTLLKCDEAQGGLKNKF 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5244g00005 727 FunFam Aurora kinase A 9 96 - -
Pral5244g00005 727 FunFam Serine/threonine-protein kinase ATG1 6 311 - -
Pral5244g00005 727 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Pral5244g00005 727 SUPERFAMILY Protein kinase-like (PK-like) 10 281 IPR011009 -
Pral5244g00005 727 CDD STKc_ATG1_ULK_like 20 270 - -
Pral5244g00005 727 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 10 636 IPR045269 GO:0004674|GO:0006914
Pral5244g00005 727 Pfam Protein kinase domain 15 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5244g00005 727 SMART serkin_6 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5244g00005 727 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Pral5244g00005 727 Gene3D Transferase(Phosphotransferase) domain 1 8 315 - -
Pral5244g00005 727 MobiDBLite consensus disorder prediction 561 584 - -
Pral5244g00005 727 MobiDBLite consensus disorder prediction 569 583 - -
Pral5244g00005 727 ProSiteProfiles Protein kinase domain profile. 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5244g00005 727 MobiDBLite consensus disorder prediction 428 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5244g00005 Pral-Chr5244 55224 63242 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5244g00005 10 280 CBL-interacting serine-threonine protein kinases AT2G30360 36.823 2.88e-54 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Pral5244g00005 Pkinase 1.4e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5244g00005 K08269 - gmx:100791596 1152.5