Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5242g00003 ATGGCCGCAAAAGAAGAACAAGTGAAGTTTTTGGGGAAATGGCCCAGCCCCTTCAGCAACAGAGTGGATCTGGCTCTCAAGTTGAAAGGAATCAAATACGATTACTCTGAAGAAGATCTCTCCAACAAAAGCCAAGAGCTTCTTACGTCCAATCCCGTTCACAAGAAGGTCCCTGTCCTCATCCACAACGGAAGACCCATTTCTGAGTCTCTCGTCATCGTTGAGTACATCGACGAGACCTGGAAATCCAATCCCTTCCTCCCTCCAAACCCTTATCACAGAGCCTCTGCTCGATTCTGGTCTAAGCTTGTTGATGAAAAGTGCTTGCCTCCGTTATGGGATGCGTTCTGGTGCGAGGAGAAGGGGCGTGAGAAGGCTGTGGAAGAAGCCATGGAAGCACTGAAGATACTGGAGAATGAAATCGGCGACAAAAGATTCTTCGGAGGAGACGACGTTGGACTCGTAGATATTTCTGCCAATTTCGTGGGTTACTGGGTTGACATATTACAAGAAATCGCAGGCTTACAGTTGCTCACTTCTGAGAAATTCCCGAAGCTGTACAAATGGAGTCAAGAATTCTCCACTCATCCTATAGTAAAGCAAGCTCTGCCTCCCAGAGATAAACTCTTTGCATTCTTCAAATCTCGCACTGGCTAG 657 0.4718 MAAKEEQVKFLGKWPSPFSNRVDLALKLKGIKYDYSEEDLSNKSQELLTSNPVHKKVPVLIHNGRPISESLVIVEYIDETWKSNPFLPPNPYHRASARFWSKLVDEKCLPPLWDAFWCEEKGREKAVEEAMEALKILENEIGDKRFFGGDDVGLVDISANFVGYWVDILQEIAGLQLLTSEKFPKLYKWSQEFSTHPIVKQALPPRDKLFAFFKSRTG 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5242g00003 218 Pfam Glutathione S-transferase, C-terminal domain 120 197 IPR004046 -
Pral5242g00003 218 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 209 IPR045073 -
Pral5242g00003 218 Gene3D Glutaredoxin 1 89 - -
Pral5242g00003 218 CDD GST_N_Tau 8 81 - -
Pral5242g00003 218 FunFam Tau class glutathione S-transferase 1 89 - -
Pral5242g00003 218 SUPERFAMILY GST C-terminal domain-like 79 216 IPR036282 -
Pral5242g00003 218 Coils Coil 120 140 - -
Pral5242g00003 218 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Pral5242g00003 218 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Pral5242g00003 218 CDD GST_C_Tau 91 216 IPR045074 GO:0004364|GO:0006749
Pral5242g00003 218 FunFam Tau class glutathione S-transferase 87 218 - -
Pral5242g00003 218 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Pral5242g00003 218 SFLD Main.3: Omega- and Tau-like 4 216 IPR045073 -
Pral5242g00003 218 SFLD Glutathione Transferase (cytosolic) 4 216 IPR040079 -
Pral5242g00003 218 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 217 IPR010987 -
Pral5242g00003 218 Gene3D - 90 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5242g00003 Pral-Chr5242 8884 9888 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5242g00003 4 218 Glutathione S-transferase Gene Family AT3G09270 56.682 1.78e-86 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5242g00003 K00799 - gmx:100527381 336.65