Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5234g00005 ATGAAGGGAGAAAAGGTGAAAGGTGGAGAAGAAGAGAAGTCACATTTAGGGGATAGCGATGTCGGTAGAACAAGCTTAGTTGTGAGCGATGCGAAAAGGGTACTTGTTGGAGCAGGGGCTCGCGCTCTCTTCTATCCCACTCTGCTTTACAATGTCCTTAGGAATAGGTTTCAGGCTGAGTTTCGATGGTGGGATAAAGTTGATGAGTTCATATTACTAGGTGCTGTTCCATTTCCTATTGATGTTCCCCGCTTAAAGGATCTCGGCGTTTGTGGAGTCATTACATTGAATGAGTCATATGAGACTTTGGTTCCAACCTCGCTATATCATGCTTATGGAATTGATCATTTGGTTATTCCTACCAGAGATTATTGTTTTGCACCGTCATTACGTGACATATGCCGTGCTGTGGACTTCCTACATGAAAATGCGTCGTCTGGGAGAAGTACTTATGTGCACTGCAAAGCTGGGCGTGGTCGCAGCACAACTATTGTTATCTGTTACTTGGTACATTACAAGATGATGACGCCTAATGCTGCATATGATTATGTAAAGTCAATTCGGCCAAGGGTCCTACTAGCATCTTCACAGTGGCGAGCTGTTGAGGAATACTTCCACCTTACGGTGAAGAAGACAGTTTTCTATGCTCCCACATCCGAGTTACTAGCAGCAAAAGATCTTATGGTAAAATTTGATGATGACGAGTCTGTAATTGTGACAGAATCAGATCTTGAAGGGTATGAAACAAGTATCCAATCTGGTGGTGTGGGGAGGGATGTATGGGCAGATGTAAGTTTTGTGTACCATGTTACCCTTGCTGGTCAGGCTGCTCTAGCAGGAATTTCATGGCCGTCTCAACCAAAGAAAATGAGACCCAATCATTTTCCTTTTGGTAAGGTTGTGTCATACTGA 912 0.4375 MKGEKVKGGEEEKSHLGDSDVGRTSLVVSDAKRVLVGAGARALFYPTLLYNVLRNRFQAEFRWWDKVDEFILLGAVPFPIDVPRLKDLGVCGVITLNESYETLVPTSLYHAYGIDHLVIPTRDYCFAPSLRDICRAVDFLHENASSGRSTYVHCKAGRGRSTTIVICYLVHYKMMTPNAAYDYVKSIRPRVLLASSQWRAVEEYFHLTVKKTVFYAPTSELLAAKDLMVKFDDDESVIVTESDLEGYETSIQSGGVGRDVWADVSFVYHVTLAGQAALAGISWPSQPKKMRPNHFPFGKVVSY 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5234g00005 303 MobiDBLite consensus disorder prediction 1 20 - -
Pral5234g00005 303 SMART dsp_5 66 207 IPR020422 GO:0006470|GO:0008138
Pral5234g00005 303 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 56 207 IPR029021 -
Pral5234g00005 303 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 131 199 IPR000387 GO:0016311|GO:0016791
Pral5234g00005 303 Pfam Dual specificity phosphatase, catalytic domain 107 204 IPR000340 GO:0008138|GO:0016311
Pral5234g00005 303 MobiDBLite consensus disorder prediction 1 19 - -
Pral5234g00005 303 FunFam Dual specificity phosphatase domain protein 63 210 - -
Pral5234g00005 303 ProSiteProfiles Dual specificity protein phosphatase domain profile. 63 210 IPR020422 GO:0006470|GO:0008138
Pral5234g00005 303 Gene3D Protein tyrosine phosphatase superfamily 63 211 IPR029021 -
Pral5234g00005 303 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 15 268 - -
Pral5234g00005 303 CDD PTPMT1 63 205 IPR044596 GO:0004721
Pral5234g00005 303 ProSitePatterns Tyrosine specific protein phosphatases active site. 152 162 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5234g00005 Pral-Chr5234 15603 18483 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5234g00005 4 282 Protein tyrosine phosphatase (PTP) family AT2G35680 60.269 3.38e-118 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5234g00005 - - jre:108994353 417.157