Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5232g00024 ATGTGCCGTCAAAATTCTCCTGTACACCATTCTACTGAGGAAGACACCGCAGCTGATGAGAGCCTTCTAATTTATTGCAAGCCTGTTGAACTGTACAATATTCTCTCCCGCCGTTCTCTTCATAATCCTTCATTTCTTAGGAGATGTCTGCGCTACAAATTACGAGGAAGGCATAAAAAGAGGTTAAGAGCTGGAATTGTGATATTCAATTATAGGGACTGTTACAACACGATTCGAAAGACTGAAGTGACTGAGGACTTTTCTTGTCCATTTTGCTTGATGCAATGCGCAAGCTTTAAGGGTTTGCGATTTCATCTTTGTGCATCACATGATCTCTTCAACTTTGAGTTTTGGGTGACTGAGGACTATCAAGCGGTCAACGTCTCTGTGAAGATTGATATATTGAGATCAGAGAATGTCACTGATGGGATAAATCCACAGTCACAAACCTTCTTCTTCTGTGCAAGGCCTCGACGACGTGTACGCAAAGGTTCTAATCAAAATGATAAGTGTGCTAATATACAGTTTCTGGAGCTGGATTCACCCATGCTGGCTACAGAAGGCATGCAGAATGGTTTTCATGAGAAGCACCATGACACCCTGTCCGGCAGAGGTGGGGACTTGTACAAGATATCTCCCAGTCAGAAAGAATTGCAGAATGGAAGACTGGATGGAGAGAAATATGGTCCTCATTATCCTGGTACTACAGATGACTTGGAACATGTTGCTTCTAGTTTCAACATTCCAGGTGTTCCAATTGCCATGCCCCAAACTTCTAGGGACCCTGAATGTAATAAATCAGTATCTAGATGTGATTCTGCTTTGCCTGCCAAGACAAGGAAGATGAACATTGATCGGTCAGACTCAAGAAATCGTATGCTCCTGCAGAAAAGACAGTTCTTTCACTCTCACAGAGTTCAGCCTATGGCACTGGAACAAGTGTTATCAGATCGAGACAGTGAAGATGAAGTTGATGATGACATTGCAGATCTTGAAGATCGAAGAATGCTTGATGATTTTGTTGACGTTTCCAAAGATGAAAAGCAGCTCATGCATCTCTGGAATTCTTTTGTGAGGAGGCAAAGTGTGCTGGCAGATGGTCATGTTCCCTGGGCCTGTGAGGCCTTTTCCAAGCTTCATGGAAAGGAGTTGATCTCATCTCCTGCATTATTTTGGTGTTGGAGGCTATTCATGATCAAACTTTGGAATCATGGCCTTCTTGATGCTTCCACAATGAACAACTGCAGTATAGTTCTAGATAGTTTCAGAAACGAGGTGTCTGATGAGAGCAAAAATTGA 1299 0.4273 MCRQNSPVHHSTEEDTAADESLLIYCKPVELYNILSRRSLHNPSFLRRCLRYKLRGRHKKRLRAGIVIFNYRDCYNTIRKTEVTEDFSCPFCLMQCASFKGLRFHLCASHDLFNFEFWVTEDYQAVNVSVKIDILRSENVTDGINPQSQTFFFCARPRRRVRKGSNQNDKCANIQFLELDSPMLATEGMQNGFHEKHHDTLSGRGGDLYKISPSQKELQNGRLDGEKYGPHYPGTTDDLEHVASSFNIPGVPIAMPQTSRDPECNKSVSRCDSALPAKTRKMNIDRSDSRNRMLLQKRQFFHSHRVQPMALEQVLSDRDSEDEVDDDIADLEDRRMLDDFVDVSKDEKQLMHLWNSFVRRQSVLADGHVPWACEAFSKLHGKELISSPALFWCWRLFMIKLWNHGLLDASTMNNCSIVLDSFRNEVSDESKN 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5232g00024 432 PANTHER POLYCOMB GROUP PROTEIN 9 60 - -
Pral5232g00024 432 CDD ZnB-Zn_EMF2-like 13 134 - -
Pral5232g00024 432 Pfam VEFS-Box of polycomb protein 282 416 IPR019135 -
Pral5232g00024 432 CDD VEFS-box_EMF2-like 295 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5232g00024 Pral-Chr5232 195565 202423 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5232g00024 1 68 C2H2 Transcription Factor Family AT5G51230 51.471 9.48e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5232g00024 - - pcin:129311384 785.023