Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5232g00023 ATGTGCCGTCAAAATTCTCCTGTACACCATTCTACTGAGGAAGACACCGCAGCTGATGAGAGCCTTCTAATTTATTGCAAGCCTGTTGAACTGTACAATATTCTCTCCCGCCGTTCTCTTCATAATCAGCCTTCATTTCTTAGGAGATGTCTGCGCTACAAATTACGAGGAAGGCATAAAAAGAGGTTAAGAGCTGGAATTGTGATATTCAATTATAGGGACTGTTACAACACGATTCGAAAGACTGAAGTGACTGAGGACTTTTCTTGTCCATTTTGCTTGATGCAATGCGCAAGCTTTAAGGGTTTGCGATTTCATCTTTGTGCATCACATGATCTCTTCAACTTTGAGTTTTGGGTGACTGAGGACTATCAAGCGGTCAACGTCTCTGTGAAGATTGATATATTGAGATCAGAGAATGTCACTGATGGGATAAATCCACAGTCACAAACCTTCTTCTTCTGTGCAAGGCCTCGACGACGTGTACGCAAAGGTTCTAATCAAAATGATAAGTGTGCTAATATACAGTTTCTGGAGCTGGATTCACCCATGCTGGCTACAGAAGGCATGCAGAATGGTTTTCATGAGAAGCACCATGACACCCTGTCCGGCAGAGGTGGGGACTTGTACAAGATATCTCCCAGTCAGAAAGAATTGCAGAATGGAAGACTGGATGGAGAGAAATATGGTCCTCATTATCCTGGTACTACAGATGACTTGGAACATGTTGCTTCTAGTTTCAACATTCCAGGTGTTCCAATTGCCATGCCCCAAACTTCTAGGGACCCTGAATGTAATAAATCAGTATCTAGATGTGATTCTGCTTTGCCTGCCAAGACAAGGAAGATGAACATTGATCGTCGTATGCTCCTGCAGAAAAGACAGTTCTTTCACTCTCACAGAGTTCAGCCTATGGCACTGGAACAAGTGTTATCAGATCGAGACAGTGAAGATGAAGTTGATGATGACATTGCAGATCTTGAAGATCGAAGAATGCTTGATGATTTTGTTGACGTTTCCAAAGATGAAAAGCAGCTCATGCATCTCTGGAATTCTTTTGTGAGGAGGCAAAGTGTGCTGGCAGATGGTCATGTTCCCTGGGCCTGTGAGGCCTTTTCCAAGCTTCATGGAAAGGAGTTGATCTCATCTCCTGCATTATTTTGGTGTTGGAGGCTATTCATGATCAAACTTTGGAATCATGGCCTTCTTGATGCTTCCACAATGAACAACTGCAGTATAGTTCTAGATAGTTTCAGAAACGAGGTGTCTGATGAGAGCAAAAATTGA 1287 0.4281 MCRQNSPVHHSTEEDTAADESLLIYCKPVELYNILSRRSLHNQPSFLRRCLRYKLRGRHKKRLRAGIVIFNYRDCYNTIRKTEVTEDFSCPFCLMQCASFKGLRFHLCASHDLFNFEFWVTEDYQAVNVSVKIDILRSENVTDGINPQSQTFFFCARPRRRVRKGSNQNDKCANIQFLELDSPMLATEGMQNGFHEKHHDTLSGRGGDLYKISPSQKELQNGRLDGEKYGPHYPGTTDDLEHVASSFNIPGVPIAMPQTSRDPECNKSVSRCDSALPAKTRKMNIDRRMLLQKRQFFHSHRVQPMALEQVLSDRDSEDEVDDDIADLEDRRMLDDFVDVSKDEKQLMHLWNSFVRRQSVLADGHVPWACEAFSKLHGKELISSPALFWCWRLFMIKLWNHGLLDASTMNNCSIVLDSFRNEVSDESKN 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5232g00023 428 PANTHER POLYCOMB GROUP PROTEIN 9 61 - -
Pral5232g00023 428 Pfam VEFS-Box of polycomb protein 286 412 IPR019135 -
Pral5232g00023 428 CDD ZnB-Zn_EMF2-like 13 135 - -
Pral5232g00023 428 CDD VEFS-box_EMF2-like 291 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5232g00023 Pral-Chr5232 195565 202423 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5232g00023 1 69 C2H2 Transcription Factor Family AT5G51230 50.725 3.01e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5232g00023 - - pcin:129311384 775.778