Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5232g00012 ATGGCCTGGCACTTTGCGTCCCTTCTTCTATCCCTCGGTCATCCAGCACATCCCGCCGACCTCGCTTCTCGATGCACATTATTTACTGCTTCTCCTGAACTAGTTGAGTTCCTCTGCTTGATCCCTGAATCTCCCATCTTGCTGACCTCCAATTTCTATGTCACTCTCTCTGCTGTTGCTATAGTCGCTGTTGGACACTTCGTCTCGGTAGCCGACTTTTTTGGTAGTTCTTTTATACCTAGATTTGGAATCAGAGTTTCCTCGACGGACGGCTGGGGAAACAGCTGTAGAAAACGGAAACGAAGGCTTATTTTAGATTCCGATTTCCTTCCCGTGGCAAAAAGAGGGATAAGTTATTATTCTGAACATGTAGATGAGTTGGATCCAATGAAATTGCTTCCTCCGAAGAGAATCAGCGATGACTCTTCTAGGATTATTTTACAGTCACATGGCACGCTAAGCATTGAATTATTCGAAAGTCCCGATCAATGCAAGGAAGTTAAAATGGAGGAAACTTCCGGAAGTAGAACAAATTTCAATGATACATTAAAAGATGTTAAATCTACCAGTATGCCTCCGTTGGTCGATGACAGGATTAATGACAATGAAGTAGTTCCAGACATTAGAATAAGTGATAGCAAAGTATCCTTGGAATGCAAGCAGATGTCTTTAATGAATTCCGGTAGCACGAAACCTCTTCAAAACATAGTACAGCCATCACATACTGCTGTTTTAGAAATGCCGCCCAAAGGTGACATTGGAAGGATTCATGATGGAAACTTCGATGAAGTTAACCATTTGAGTGGAAAGTCAATGGCTGCAGATATGAAAAGTATGGACTTCTCTATGGGTCCCCTTTCTGCACAGAAGTTTCCTCAATCCTCTTTCAAGACAAATGCGGTGCCCAGCGATGTTACTGTTCCTAGTCTGCAAAACACGTCCAAAAATTTACATAATGAAGAGAAGCGGAACTTCAATAGAGGTCAGCCATCAATGAGTAAGGGACAGAAAAACAATTGCACTGCCATGCATTTCAAGGAAAAAAGGGGAACTTCGATCTCAACGTGTCCTGAGGATCAAAAGGAGCGTAAGGATCTTCCAACATTTGAATCGTACATTGTGGAAGAGGAAGAAGGCTCAGGTGCTTATGGCATTGTTTACAAGGCAAGGAGGAAGAATGATGGAGCCACGGTTGCCCTTAAATGTCCTCATGCTAAAGCTCATGGGCAATATGTTACTAACGAGCTCAAAGTGCTGGAGCGATTTGGAGGCAAAAACTTTATCATTAAATATGAAGGCAGCTTCAAGAATGGCAACACTGATTGCTGTGTTCTAGAACATATTGAGCACGACAGGCCTGAGGTGTTAAGGAAGGAAATTGATGTTGTTCAACTCCGATGGTATGGTTACTGCATGTTCCGGGCTCTTGCGGCTCTTCACAAGCGGGGAGTAATACACAGAGATGTTAAACCTGGCAATTTCCTTTTCTCCCGTAAGCTCAACAAGGGTTATCTGATTGATTTCAATCTTGCCAAGGATCTGCATCAGAAGCCGGGAAATATCGCTTCAACCAAATGCAGAAAGTTCCCAAATGTCAATTTTTTGGAAGCTGCCAATCAACAGATAACTAATGCCTCCAAATCAATATTAGATCCTAAGGACAGCAGAAGAAAGGCTGTGGCGCAGTCGAAGACTAAAAATGACCGAGGTAGTGGGCAGGTGATGAAAAGTCAAGGTGCAGACGGCTCTGGCGTAACTTCGGCGAAGGACGTCACCAGCGCAAGAACATCACTTGAAAAGAGACTGAGTCTGGTAAGGCCAAGGAGGAAAGAGTTGATTAACATCTTGCAAGAAACGCTGTTAGGTCCGAATCAAGAATTATCAAACACTCCTATGAGAAAGCGGGTTCCTGCTCCTCGTAATAAGATGGAGAGTGAGCATGTCTACATCTCTCCCATGCCTTTGAACTCAATTGGCAATGATGCCACCGGTGCTGGATTTCTGAAGAGTAAAGGGAATGGAAAACAGACAAGAGAAGGTTCTTGTGTGGGAACAAAAGGCTTTCGGGCTCCAGAGGTATTGTTCAGGTCTCCACATCAAGGTCCTAAGCTTGACATCTGGTCTGCCGGTGTATCCTTGCTCTATCTCATAATCGGGAAAACTCCTTTCACTGGAGATCCTGAACAGAACATAAAAGATATAGCTAAACTGAGAGGCAGTGAGGATCTATGGGAGGTTGCTAAGCTACACAATCGGGAATCCTCGTTCCCTGCGGACTTGTACGATAAACACAGTTTGCCATTTTTGCGACTTCGAGATTGGTGCATAATGAACACTAAGAGACCAGAATTCCTGGAAGTCATTCCCGGTTCACTGCTTGATCTCTTGGACAAGTGCTTGATGGTGAACCCTAGACTGAGAATCGGTGCAGAGGAGGCTCTTCAGCATGAGTTTTTTGCTCCATGCCATGAGAGCTTGAGGAAGGAAAGGCAATGCAAGAAGGAATTGAGTTGA 2514 0.4415 MAWHFASLLLSLGHPAHPADLASRCTLFTASPELVEFLCLIPESPILLTSNFYVTLSAVAIVAVGHFVSVADFFGSSFIPRFGIRVSSTDGWGNSCRKRKRRLILDSDFLPVAKRGISYYSEHVDELDPMKLLPPKRISDDSSRIILQSHGTLSIELFESPDQCKEVKMEETSGSRTNFNDTLKDVKSTSMPPLVDDRINDNEVVPDIRISDSKVSLECKQMSLMNSGSTKPLQNIVQPSHTAVLEMPPKGDIGRIHDGNFDEVNHLSGKSMAADMKSMDFSMGPLSAQKFPQSSFKTNAVPSDVTVPSLQNTSKNLHNEEKRNFNRGQPSMSKGQKNNCTAMHFKEKRGTSISTCPEDQKERKDLPTFESYIVEEEEGSGAYGIVYKARRKNDGATVALKCPHAKAHGQYVTNELKVLERFGGKNFIIKYEGSFKNGNTDCCVLEHIEHDRPEVLRKEIDVVQLRWYGYCMFRALAALHKRGVIHRDVKPGNFLFSRKLNKGYLIDFNLAKDLHQKPGNIASTKCRKFPNVNFLEAANQQITNASKSILDPKDSRRKAVAQSKTKNDRGSGQVMKSQGADGSGVTSAKDVTSARTSLEKRLSLVRPRRKELINILQETLLGPNQELSNTPMRKRVPAPRNKMESEHVYISPMPLNSIGNDATGAGFLKSKGNGKQTREGSCVGTKGFRAPEVLFRSPHQGPKLDIWSAGVSLLYLIIGKTPFTGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPADLYDKHSLPFLRLRDWCIMNTKRPEFLEVIPGSLLDLLDKCLMVNPRLRIGAEEALQHEFFAPCHESLRKERQCKKELS 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5232g00012 837 Gene3D Transferase(Phosphotransferase) domain 1 452 595 - -
Pral5232g00012 837 FunFam Probable serine/threonine-protein kinase DDB_G0291918 364 528 - -
Pral5232g00012 837 SMART serkin_6 372 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5232g00012 837 MobiDBLite consensus disorder prediction 546 593 - -
Pral5232g00012 837 Pfam Protein kinase domain 679 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5232g00012 837 Pfam Protein kinase domain 374 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5232g00012 837 MobiDBLite consensus disorder prediction 170 198 - -
Pral5232g00012 837 SUPERFAMILY Protein kinase-like (PK-like) 369 826 IPR011009 -
Pral5232g00012 837 PANTHER OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED 331 833 - -
Pral5232g00012 837 Gene3D Phosphorylase Kinase; domain 1 359 447 - -
Pral5232g00012 837 Gene3D Transferase(Phosphotransferase) domain 1 661 837 - -
Pral5232g00012 837 MobiDBLite consensus disorder prediction 550 564 - -
Pral5232g00012 837 FunFam Kinase like protein 657 830 - -
Pral5232g00012 837 ProSitePatterns Serine/Threonine protein kinases active-site signature. 484 496 IPR008271 GO:0004672|GO:0006468
Pral5232g00012 837 MobiDBLite consensus disorder prediction 173 187 - -
Pral5232g00012 837 MobiDBLite consensus disorder prediction 565 593 - -
Pral5232g00012 837 ProSiteProfiles Protein kinase domain profile. 372 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5232g00012 Pral-Chr5232 138686 144291 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5232g00012 683 819 Core Cell Cycle Gene Families AT3G48750 33.793 4.84e-11 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-2 Pral5232g00012 Pkinase 1.2e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5232g00012 K02214 - pcin:129310665 1412.9