Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5232g00010 ATGGATCAACAGAAGCTTATGGATTTTCTAGCATCTAAATCGTACGAGGAAATAAAGGAAGTAAGCAAAGGTGCTCATGGCACTGTTTACAAGGCAAAGAGGAAGAATAGTGGAGGTGGAGCCACCAGGGTTGCCCTTAAATGTATCCCATTAAAACAAGGTCCTGCTGCTGAAGCTCACGAGCAACGTCAACGTCTTGCTAAGGAGTGGGAAGTGCTGGAGCAACATGGAGGCAAAAACTATATCATTAACTATAAAGACAGATTCAAGAATGGAAATACTCATTGCTTTGTTCTCCAATATATCGAGCACGACAAGCCTGAGGTGTTAAAGGAGGAAATTAGTATTGATCAGCTCCGACGGTATGGTTACTGCATGTTCCGGGCTCTTGCAGCTCTTCACGAGGGGGGAGTGATACACACAGATGTTAAACCTGGGAGTTTCCTTTTCTCCCGTAAGCTTAAAAAAGGGTATCTGACTGATTTCTATCATGCCAGGTTTCCGGATGAGAACCCTGTCGACGGCTCTCCCATGCCTTCAAAACAACCAATTGCCAATGATGCCGCTGGTCCTGGAGAGCAGATAAGAAAAGGTCCTTGGGTGGGAACAAGGGGCTATCGGGCTCCAGAGGTATTGTTCAGGTCTCCACATCAAGGTCCTAAGCTTGACATCTGGTCTGCCGGCGTATCCTTGCTCTATCTCATAATGGGAAAAACTCCTTTCACTGGAGACCCTGAACAGAACATAAAGGATATAGCTAGACTGAGAGGCAGTGAGGATCTATGGGAGGTTGCTAAGCTACACAATCGGGAATCCTCGTTCCCTGCGGACTTATACGATAAACACAGTTTGCCATTTTTGCGACTTCGAGATTGGTGCATAATGAACACTAAGAGACCAGAATTCCTGGAAGTCATTCCCGGTTCACTGCTTGATCTCTTGGACAAGTGCTTGATGGTGAACCCTAGACTGAGAATCGGTGCAGAGGAGGCTCTTCAGCATGAGTTTTTTGCTCCATGCCATGAGAGCTTGAGGAAGGAAAGGCAATGCAAGAAGGAATTATTGAGTTGA 1071 0.4613 MDQQKLMDFLASKSYEEIKEVSKGAHGTVYKAKRKNSGGGATRVALKCIPLKQGPAAEAHEQRQRLAKEWEVLEQHGGKNYIINYKDRFKNGNTHCFVLQYIEHDKPEVLKEEISIDQLRRYGYCMFRALAALHEGGVIHTDVKPGSFLFSRKLKKGYLTDFYHARFPDENPVDGSPMPSKQPIANDAAGPGEQIRKGPWVGTRGYRAPEVLFRSPHQGPKLDIWSAGVSLLYLIMGKTPFTGDPEQNIKDIARLRGSEDLWEVAKLHNRESSFPADLYDKHSLPFLRLRDWCIMNTKRPEFLEVIPGSLLDLLDKCLMVNPRLRIGAEEALQHEFFAPCHESLRKERQCKKELLS 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5232g00010 356 ProSiteProfiles Protein kinase domain profile. 15 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5232g00010 356 FunFam Kinase like protein 177 348 - -
Pral5232g00010 356 SUPERFAMILY Protein kinase-like (PK-like) 9 344 IPR011009 -
Pral5232g00010 356 Gene3D Transferase(Phosphotransferase) domain 1 115 355 - -
Pral5232g00010 356 Pfam Protein kinase domain 15 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5232g00010 356 PANTHER OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED 13 351 - -
Pral5232g00010 356 SMART serkin_6 15 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5232g00010 356 FunFam Kinase like protein 102 168 - -
Pral5232g00010 356 Gene3D Phosphorylase Kinase; domain 1 7 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5232g00010 Pral-Chr5232 117288 127662 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5232g00010 15 337 Core Cell Cycle Gene Families AT3G48750 28.402 7.66e-24 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-2 Pral5232g00010 Pkinase 2.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5232g00010 K02214 - pcin:129310665 315.464