Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5232g00005 ATGTCCTGCTCGTCGGAGAACTCGGAGGTTTCTGACTTGAAGCCGGTCAAGTCGTCGGAGCAGTCTGCCTTCTCGCAGACTTGTAGCCTGTTGAGTCAGTACCTCAAGGAAAAAGGCGGCTTCAGCTTCGGAGATCTTAGTCTTGGAATGACAGGCAACATCAATGGAACTGGGTCTGTTGAGACATCTTGTCAATCTGCAACAATGAAGAACCTTCTTCCGACCCATACTGCCACGAATCCCAGTGTGATGAATTCTGCAAGTAAGGAGCCCAAATCTGAACAGTTAACTATCTTCTATGGGGGACAAGTTCTTGTGTTTGATGATTTTCCAGCTGAGAAAGCCAAGGAGATCATGTCCCTTGCACGCAAAGGAATCTCCCAAACTCAAAACAGATCTGCTTATACATATCCTTCATTTCCTCCTAAGTTGGTCACAATCTCTGCTGATTCTAATGTTGCCAGCAATTTGGTTAAAGAGCACTCTCAAGCACAACCCAGACCTGTTATTGCTGATCTACCAATTGCTAGGAAAGCTTCACTTCATCGGTTCTTGGAGAAGAGGAAGGATAGAATCGCTGCCAGAGCTCCATATCAAACAAACAATGCCAAGAAGCCAGCTGAAGCCATGCCATGGACGGGCTCGTCTCCTAATTCACCACGAGTCTGA 669 0.4664 MSCSSENSEVSDLKPVKSSEQSAFSQTCSLLSQYLKEKGGFSFGDLSLGMTGNINGTGSVETSCQSATMKNLLPTHTATNPSVMNSASKEPKSEQLTIFYGGQVLVFDDFPAEKAKEIMSLARKGISQTQNRSAYTYPSFPPKLVTISADSNVASNLVKEHSQAQPRPVIADLPIARKASLHRFLEKRKDRIAARAPYQTNNAKKPAEAMPWTGSSPNSPRV 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5232g00005 222 SMART tify_2 89 124 IPR010399 -
Pral5232g00005 222 MobiDBLite consensus disorder prediction 192 222 - -
Pral5232g00005 222 ProSiteProfiles Tify domain profile. 89 124 IPR010399 -
Pral5232g00005 222 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 15 207 IPR040390 -
Pral5232g00005 222 MobiDBLite consensus disorder prediction 1 22 - -
Pral5232g00005 222 Pfam Jas motif 174 199 IPR018467 -
Pral5232g00005 222 Pfam tify domain 90 122 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5232g00005 Pral-Chr5232 45269 47117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5232g00005 1 214 Tify Gene Family AT1G19180 37.597 1.95e-37 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pral5232g00005 tify 2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5232g00005 K13464 - gmx:100801449 248.44