Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5232g00003 ATGGAGGAAAGGTATGAGGCATTGAAGGAGCTTGGCTCTGGGAATTTCGGGGTGGCCAGGCTGGTCAGAGATAAGAAGACTAAAGAGCTCGCTGCTGTCAAATACATTGAAAGGGGGAAAAAGATTGATGAGAATGTTCAAAGGGAGATCATCAACCACCGATCTCTAAGGCATCCAAACATTATCAAGTTCAAAGAGATTGTGCTGACCCCAACCCATTTGGCTATTATCATGGAGTACGCTGCAGGTGGTGAACTCTTTGAGAGGATTTGCAGTGCTGGTAGATTCAGTGAAGATGAGGCAAGATTTTTCTTCCAGCAGCTAATTTCTGGAGTTAGCTACTGTCATTCAATGGAGATTTGTCATAGAGATCTGAAATTAGAGAACACTCTCTTGGATGGAAGTCCGAATCCTCGGGTTAAAATATGTGACTTTGGTTACTCCAAGTCTGCTTTACTTCATTCTCAACCTAAATCAACCGTTGGAACTCCGGCTTACATTGCTCCAGAGGTTTTGTCCCGAAAGGAGTATGATGGAAAGATTGCAGACGTATGGTCCTGTGGTGTGACTTTGTATGTCATGTTAGTTGGAGCATACCCGTTTGAAGATCCTGATGATCCTAGGAATTTCCGAAAGACGATTGGGAGAATCTTGAGCGCTCAGTACAGCATCCCTGACTATGTGCGTGTCTCTGCGGACTGCAGGCATCTTCTTTCTTGCATATTTGTTGCCAATCCTGCCAAGAGGATAAGCATACCAGAGATAAAACAACACCCATGGTTTCTGAAGAACTTGGCGAAGGAGATGGGGAAAGGGAAGGACGAAGCAGAGAAAGAGGAAGGAAGGCAGAGTGTGGAAGAGATAATGAGGATCATACAGGAGGCAAGAACTACAGCGGGGCAAGGATCCAACGGTGGAGGCGTAGTTGGTGGAGGGTCATTGGACGGTGGGGATCTTCAGGCAGATGAGGAATCTGAAGTTGATGTTAGTGGTGACTATACTGAGAACTAG 1011 0.458 MEERYEALKELGSGNFGVARLVRDKKTKELAAVKYIERGKKIDENVQREIINHRSLRHPNIIKFKEIVLTPTHLAIIMEYAAGGELFERICSAGRFSEDEARFFFQQLISGVSYCHSMEICHRDLKLENTLLDGSPNPRVKICDFGYSKSALLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPDDPRNFRKTIGRILSAQYSIPDYVRVSADCRHLLSCIFVANPAKRISIPEIKQHPWFLKNLAKEMGKGKDEAEKEEGRQSVEEIMRIIQEARTTAGQGSNGGGVVGGGSLDGGDLQADEESEVDVSGDYTEN 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5232g00003 336 ProSiteProfiles Protein kinase domain profile. 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5232g00003 336 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Pral5232g00003 336 Pfam Protein kinase domain 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5232g00003 336 Coils Coil 262 282 - -
Pral5232g00003 336 FunFam Serine/threonine-protein kinase SRK2E 81 269 - -
Pral5232g00003 336 SMART serkin_6 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5232g00003 336 Gene3D Transferase(Phosphotransferase) domain 1 81 268 - -
Pral5232g00003 336 MobiDBLite consensus disorder prediction 319 336 - -
Pral5232g00003 336 PANTHER SERINE/THREONINE KINASE 3 276 - -
Pral5232g00003 336 MobiDBLite consensus disorder prediction 293 336 - -
Pral5232g00003 336 SUPERFAMILY Protein kinase-like (PK-like) 3 264 IPR011009 -
Pral5232g00003 336 CDD STKc_SnRK2 4 260 - -
Pral5232g00003 336 FunFam Serine/threonine-protein kinase SRK2E 1 80 - -
Pral5232g00003 336 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Pral5232g00003 336 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5232g00003 Pral-Chr5232 34810 38059 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5232g00003 4 318 CBL-interacting serine-threonine protein kinases AT2G30360 37.615 2.11e-67 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Pral5232g00003 Pkinase 2.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5232g00003 K14498 - csav:115716582 550.821