Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5230g00034 ATGAGCTGTTTCTTCTTCAGAAAGAAATGTAATCGGAGGAGAGAATCAAAATCGGCCCCGGATTTGCAAAATGAGAGGCAGAGTAACAACCCGGCGGTGAACCGGGTATCCAAGTCGACGAGTTCGATACCGTCGCCGAGGAGCTTGACTGAGCTGTACAAAGAGAAAGCCAAAGAGAACAATTTCAGAGTTTTTAGTTGGCAAGAGCTGCTAGAAGCAACGAATGGCTTCAATAAGATGCTCAAGATTGGTGAAGGTGGCTTTGGGAGCGTGTATAAAGGTACGATTAGGCCTCCCGGTGGACGAGGCGATCCAGTCGTCGTAGCCATAAAAAAGCTCAACAAGCATGGCTTTCAGGGTCACAAAGAATGGCTTGCTGAAGTTCAATTTCTTGGCGTTGTAAATCATCCAAATCTGGTAAAACTTCTGGGATACTGCTCAGTTGATGGAGAAAGAGGGATCCAACGGTTGTTGGTGTATGAGTATATGGCAAATAAAAGCCTAGAACATCATCTTTTTAATCCTTCTCGTCCTACCTTGCCTTGGAAAACAAGACTGCAGATCATGATCGGTGCCGCAGAAGGATTGGCTTATTTGCATGAAGGATTGGAATTTCAGGTGATATACCGAGATTTCAAAACTTCAAATGTTCTATTGGATGAGGATTTCCGCCCAAAGCTCTCAGACTTTGGTCTTGCAAGGGAAGGCCCCCAAGGCGATAATACTCATGTCTCTACAGCGGTGGTTGGAACTCAAGGATACGCTGCTCCGGAGTATGTAGAAACGGGGCATCTCAAAGTTGAATGTGACATTTACAGTTTTGGAGTGGTACTGTATGAGATCATCACAGGGAGGCGAGCATTAGACAGAAACCGTCCAGCTGCAGAACAAAAACTTCTAATTTGGGTTAAACAATATCCTGCTGACACTGGCAGATTCAGCATGATCATCGACCCGCGTCTCAGAAACAATTTTTCTCCTGGCGCGGTTCGCAAAGTTGCCAAGTTGGCTGATGCCTGTACAAGTAAGAATCCTCAAGACAGGCCAACCATGTCTCAGATAGTTGCAAGCTTGAAGGAAGCGTTGCAGGTTTCAGAAAGCTCTGATGCTTCTCAGACAGCGGCTGCCGGGTCATCTCGATCTTCTTTGGCTCGAAGAGGTAAATAA 1167 0.4602 MSCFFFRKKCNRRRESKSAPDLQNERQSNNPAVNRVSKSTSSIPSPRSLTELYKEKAKENNFRVFSWQELLEATNGFNKMLKIGEGGFGSVYKGTIRPPGGRGDPVVVAIKKLNKHGFQGHKEWLAEVQFLGVVNHPNLVKLLGYCSVDGERGIQRLLVYEYMANKSLEHHLFNPSRPTLPWKTRLQIMIGAAEGLAYLHEGLEFQVIYRDFKTSNVLLDEDFRPKLSDFGLAREGPQGDNTHVSTAVVGTQGYAAPEYVETGHLKVECDIYSFGVVLYEIITGRRALDRNRPAAEQKLLIWVKQYPADTGRFSMIIDPRLRNNFSPGAVRKVAKLADACTSKNPQDRPTMSQIVASLKEALQVSESSDASQTAAAGSSRSSLARRGK 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5230g00034 388 MobiDBLite consensus disorder prediction 365 380 - -
Pral5230g00034 388 ProSitePatterns Protein kinases ATP-binding region signature. 83 112 IPR017441 GO:0005524
Pral5230g00034 388 Gene3D Phosphorylase Kinase; domain 1 49 162 - -
Pral5230g00034 388 PANTHER OS01G0588500 PROTEIN-RELATED 33 362 - -
Pral5230g00034 388 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Pral5230g00034 388 CDD STKc_IRAK 83 360 - -
Pral5230g00034 388 MobiDBLite consensus disorder prediction 365 388 - -
Pral5230g00034 388 MobiDBLite consensus disorder prediction 15 47 - -
Pral5230g00034 388 Gene3D Transferase(Phosphotransferase) domain 1 163 382 - -
Pral5230g00034 388 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 163 372 - -
Pral5230g00034 388 SUPERFAMILY Protein kinase-like (PK-like) 55 358 IPR011009 -
Pral5230g00034 388 ProSiteProfiles Protein kinase domain profile. 77 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5230g00034 388 Pfam Protein tyrosine and serine/threonine kinase 81 358 IPR001245 GO:0004672|GO:0006468
Pral5230g00034 388 MobiDBLite consensus disorder prediction 22 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5230g00034 Pral-Chr5230 275568 278840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5230g00034 1 358 Glycoside Hydrolase AT3G07070 43.443 2.13e-94 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pral5230g00034 PK_Tyr_Ser-Thr 8.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5230g00034 - - adu:107483795 563.148