Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5229g00003 ATGGAACTTCTCGCTCTCAGACATTTTCCCTTCTTACTATATTCTCTGCTGTGCTTGTTTCATTTCTCTTTGCAGGCTTCTTTAATGGGTGATTCTGAGATTCTTCTGCGGGTTAAGACTACTCAGATCATTGATGAGAATGGTAGCCTCAAAAATTGGGATAGAGGCCTTAATCACTGCAACTGGATTGGCATTACCTGTGATGAGCTTAATCGCTCAGTTGTTGCCATTGACCTCTCTGGCACCGGCATTTATGGTGGATTTCCGTTCGGTTTTTGTCGGATTCGGACCCTGCGAAGGCTTTCTGCTGCGCAAAATTATCTCGGTGGTGTTGTCTCTACTCAATCACTCCTTCTCTGTGCCCACCTTCGTGTCTTGAACCTCTCTGATAACTTATTTGTCGGCGAGTTGCCGCAATTCTTGTCGGAGTTCTCTGAACTGAGACGGCTTGATTTCTCGCGTAACAACTTCACTGGCGATATTCCGGCAAATTTTGGCCGGTTTCCACATCTTAGAGTGCTGAGTTTGTCGGGGAACTTGCTCAGCGGAACCATTCCCGCGTTCTTAGGGAATCTCAGTGAGTTAACTAGATTGGAACTCGCTTATAATCCGTTCCGACCAGGACCTTTACCCTCCCAGCTTGGAAATTTATCCAAACTCGAAGTTATGTTCCTTGCGAATTCAAATGTCGAAGGGAGTATACCGGACTCGATAGGGAAGCTGCTCTCGCTCAAGAACTTGGATATGTCGAAAAATTTATTGTCAGGTAAAATTCCAGACAGCATTTCGGGTTTGGCAAGTGTAGAACAAATTGTGCTATTTCTAAACCAACTTTCAGGTGAAATTCCTCAAGGTCTGGGAAACCTTAGCACTTTAATTAGTTTAGACCTCTCTCAAAATAGTCTCACAGGGAAATTGCCTGATTCACTCGCTGCCTTGCGTCTCCAATCGCTTTCATTGAACGACAATTTCCTCGAAGGAGAAATCCCCGTGAATGTAGCTACAAATCCAAATCTACTGAGACTAATTCTCTTTAATAACAGCTTTACTGGGAAGCTACCTGAAGATCTCGGTCGAAACTCTGATTTACGGGAGCTTGATGTTTCTACCAATGACTTTGTTGGCGAATTGCCTAAGTACGTCTGTCAAAGGAACAAGTTGCAGCGTCTTATCACATTCAGGAATCGCTTTTCCGGAAATCTCCCTGAGCAGTATGGTGACTGTCATTCACTCGACTACGTCAGAATCGAGCACAACCAGCTTTCTGGTGAGGTGCCTCTAAAATTTTGGAAACTTCCTGGCCTCGAATTTTTAAAGATGAATGACAACTTGTTGGAAGGTTCATTCTCCATCTCCGGCGCTCAGAGGCTCTCTGCACTTCATATATCTGATAACAGGTTTTCTGGACATTTGTCGGCAGAAATTTGTGAACTCCACAACATTATAGAGATTGACATGAGCCGGAACCAGTTCACCGGTGAAGTTCCGTCATGTATAACTGGATTAAAGAAGTTACAGAAGCTGAGCATGCAGGGGAACATGTTCACTGGCGCGATTCCTCGTAATGTAGATTCCTGGAGTGACTTGACCCTATTGAACTTGTCGTGTAACCGATTCACAGGTACAATTCCGCCAGAGCTTGGTAATTTGCCAGATTTGAGTTCGCTTGATCTGGCTATGAATTTCCTGACTGGGGGGATTCCGCCAGAGTTAGCAAAGCTCAAGCTCAGCCAGTTCAACGTGTCGGGAAACAAGTTGTCTGGAAATGTACCTTCAGGGTTCAACAGTGAATTCTATTGGTCGGGTCTGGTTGGTAATCCGAACCTCTGCAGCGAAGTCATGAAATTCCTTCCTCCTTGTTCCGAATCGAAACGCTTCTCTTCGATAGCTATTATTGTGTTATCTACCTTCGTTGTACTCCTTCTGGGGCTTCTCCTCTTGTTCCTTAAGAGGAAGAAGTCATTATTTTTAACTGGCCAACCCAAGCACTTTGTCAAGACGACAACATTCCATATGGTGGGCTTTAAGGAAGAAGATGTTGTTCCATTCCTAACCAGTGAGAATCTCATTGGCACAGGGAGCTCGGGCCAGGTCTATCGGGTGAAGCTCAAGACAGGAGAGACAGTTGCTGTGAAGAAGTTTTGGGAAGGGCGTTCAGGAAAACTGAATACAGATTCGGTTTTCAAAACGGAGATTGAGACACTTAGTAGAACTCGGCACGTTGATATAGTAAAATTGTTATATAGTTGCAGTGCTGACGATTTCCAGATTCTGGTGTACGAGTATTTGGAGAATGGCAGCTTGAGTGACGTTTTGCACGGTGAAAAGTGCAGGGAGTTGATGCATTGGTCGAGGCGGTTCACCATAGCAGTAGGTGTCGCTCGGGGACTGGCTTATTTACACCACGACTGTGTGCCGCCTATAGTTCACAGAGACGTCAAGAGTAGCAACATATTGCTGGATCATGATTTCAGACCTCGTGTTGCAGACTTTGGGTTGGCTAGGACCTGGCAGCCAAAGGCAAACGAAGATGGTGGCGGGGCTACATCCAGGGTCGCTGGGTCCTATGGTTACATTGCTCCTGAATATGCTTACACACGCAAAGTAACTGAGAAAAGTGATGTGTATAGCTATGGTGTGCTACTGATGGAATTGGTCACAGGCAAGAGGCCAAATGATCCATCTTTTGGTGAGAACAAGGATATAGTGAAGTGGCTCACTGAGACTGCTTTATCAAGCTCTGCAGGAGGGAGTGACAATGTGGAAGGTTATCGCCGTGGCCTGGTTCAGATTGTAGACCCTAGATTGAACCCCTCCACGTATGATTATGAAGAGATTAGGAAGGTTTTGAATGTGGCTCTGCTTTGCACCTCAAGGATCCCGGTTAATAGACCCTCAATGAGAAGGGTGGTTGACTTGCTGTGGGGACTAAAGACTCGTCCCAAGTCATGA 2952 0.456 MELLALRHFPFLLYSLLCLFHFSLQASLMGDSEILLRVKTTQIIDENGSLKNWDRGLNHCNWIGITCDELNRSVVAIDLSGTGIYGGFPFGFCRIRTLRRLSAAQNYLGGVVSTQSLLLCAHLRVLNLSDNLFVGELPQFLSEFSELRRLDFSRNNFTGDIPANFGRFPHLRVLSLSGNLLSGTIPAFLGNLSELTRLELAYNPFRPGPLPSQLGNLSKLEVMFLANSNVEGSIPDSIGKLLSLKNLDMSKNLLSGKIPDSISGLASVEQIVLFLNQLSGEIPQGLGNLSTLISLDLSQNSLTGKLPDSLAALRLQSLSLNDNFLEGEIPVNVATNPNLLRLILFNNSFTGKLPEDLGRNSDLRELDVSTNDFVGELPKYVCQRNKLQRLITFRNRFSGNLPEQYGDCHSLDYVRIEHNQLSGEVPLKFWKLPGLEFLKMNDNLLEGSFSISGAQRLSALHISDNRFSGHLSAEICELHNIIEIDMSRNQFTGEVPSCITGLKKLQKLSMQGNMFTGAIPRNVDSWSDLTLLNLSCNRFTGTIPPELGNLPDLSSLDLAMNFLTGGIPPELAKLKLSQFNVSGNKLSGNVPSGFNSEFYWSGLVGNPNLCSEVMKFLPPCSESKRFSSIAIIVLSTFVVLLLGLLLLFLKRKKSLFLTGQPKHFVKTTTFHMVGFKEEDVVPFLTSENLIGTGSSGQVYRVKLKTGETVAVKKFWEGRSGKLNTDSVFKTEIETLSRTRHVDIVKLLYSCSADDFQILVYEYLENGSLSDVLHGEKCRELMHWSRRFTIAVGVARGLAYLHHDCVPPIVHRDVKSSNILLDHDFRPRVADFGLARTWQPKANEDGGGATSRVAGSYGYIAPEYAYTRKVTEKSDVYSYGVLLMELVTGKRPNDPSFGENKDIVKWLTETALSSSAGGSDNVEGYRRGLVQIVDPRLNPSTYDYEEIRKVLNVALLCTSRIPVNRPSMRRVVDLLWGLKTRPKS 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5229g00003 983 Pfam Leucine rich repeat 146 204 IPR001611 GO:0005515
Pral5229g00003 983 ProSitePatterns Serine/Threonine protein kinases active-site signature. 808 820 IPR008271 GO:0004672|GO:0006468
Pral5229g00003 983 FunFam Leucine-rich receptor-like protein kinase family protein 210 308 - -
Pral5229g00003 983 SMART serkin_6 684 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5229g00003 983 Gene3D Transferase(Phosphotransferase) domain 1 763 982 - -
Pral5229g00003 983 Pfam Protein kinase domain 686 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5229g00003 983 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 386 974 - -
Pral5229g00003 983 Gene3D Phosphorylase Kinase; domain 1 678 762 - -
Pral5229g00003 983 Gene3D Ribonuclease Inhibitor 311 623 IPR032675 -
Pral5229g00003 983 Gene3D Ribonuclease Inhibitor 29 310 IPR032675 -
Pral5229g00003 983 Pfam Leucine Rich Repeat 292 312 IPR001611 GO:0005515
Pral5229g00003 983 ProSitePatterns Protein kinases ATP-binding region signature. 690 713 IPR017441 GO:0005524
Pral5229g00003 983 FunFam Leucine-rich repeat receptor-like protein kinase TDR 310 622 - -
Pral5229g00003 983 SUPERFAMILY RNI-like 72 381 - -
Pral5229g00003 983 SUPERFAMILY L domain-like 313 618 - -
Pral5229g00003 983 FunFam Leucine-rich repeat receptor-like protein kinase 763 983 - -
Pral5229g00003 983 FunFam Leucine-rich repeat receptor-like protein kinase 29 187 - -
Pral5229g00003 983 SUPERFAMILY Protein kinase-like (PK-like) 683 978 IPR011009 -
Pral5229g00003 983 ProSiteProfiles Protein kinase domain profile. 684 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5229g00003 983 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5229g00003 Pral-Chr5229 26540 30151 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5229g00003 25 979 Receptor kinase-like Gene Family AT5G65710 53.996 0.0 1003
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral5229g00003 Pkinase 1.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5229g00003 - - gmx:100813889 1255.35