Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5227g00048 ATGGAAATAACAGAGGCGATTACAAGAGAGAGAACCATATGTCCGATATGCAAGGAGGAGTTCAAATTAGGAGGAGATGCAGGCAAATTACCTTGCGGCCATTTCTTTTGCTTCGAATGTATCCATGTTTGGCTTAACTTTGACCAAAACGATACTTGCCCTGTTTGTCGTCGTCCCTTTCCTTCAACGAATTTCCGATCACCTGGAATCGCAGTCCCACCCCCACCTACAGTTCTTGATAGTCCCTGGGAATATTTCTTCTTCCCTCCTGAGCCCATTCTTACTGAGTCACATCTTGTTGCCGATGAAACTGGGTCGTCATCTTCCCCATCAATAATCAATAGCGAAGCTGGTTATGACACTGCACGTGACGAGCTTGATGCATCTCATGACCATCCACAAGCCTCTCTTGCTTCTTCCACACCTACGACTGTCTTTCCCTAA 444 0.4617 MEITEAITRERTICPICKEEFKLGGDAGKLPCGHFFCFECIHVWLNFDQNDTCPVCRRPFPSTNFRSPGIAVPPPPTVLDSPWEYFFFPPEPILTESHLVADETGSSSSPSIINSEAGYDTARDELDASHDHPQASLASSTPTTVFP 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5227g00048 147 Pfam Ring finger domain 13 57 IPR001841 -
Pral5227g00048 147 SUPERFAMILY RING/U-box 6 63 - -
Pral5227g00048 147 ProSiteProfiles Zinc finger RING-type profile. 14 57 IPR001841 -
Pral5227g00048 147 MobiDBLite consensus disorder prediction 120 147 - -
Pral5227g00048 147 MobiDBLite consensus disorder prediction 133 147 - -
Pral5227g00048 147 ProSitePatterns Zinc finger RING-type signature. 32 41 IPR017907 -
Pral5227g00048 147 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 70 IPR013083 -
Pral5227g00048 147 PANTHER RING ZINC FINGER PROTEIN 10 94 - -
Pral5227g00048 147 SMART ring_2 14 56 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5227g00048 4 66 C3H Transcription Factor Family AT3G02340 34.921 2.09e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5227g00048 K11982 - ccaj:109817940 85.8853