Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5227g00045 ATGCTGTCCACTCTTCCCCCTTCTGATCCTTTCCTCAATAACCCCTTCTGGGCCTTGGACGGCTCTTTCCCTACTCCTTGGGAGGGCCCGGGCTTCAGCCCCAGTCTTCTTTCCTCCCCCGTCAAGCCGGTCGGTAAGTCCCAAACCCATGCAGGCTCTGATGCCGATGTGAAACACGTGGCGTCATCCATTCTCGACGAGCGGAAACGGCGGAGAATGATATCGAACCGGGAGTCAGCGAGGCGGTCGCGCATGCGAAAGCAGAAGCATCTAGAGAACCTAAGGTCTCAGGTGACCCGCTTTAGGATCCAGAACCGGGAACTCAACAACAGGTTGCAGTTTCTTCTGCATCACTATAACCGAGTGATCACGGAGAACCAATGGCTCCGGTCCGAGCAAACCCAGCTCCGACAAAAACTTCACGATATAACTCAAATTTTGGCCCTCCAGCCCTTCTCTTCGTCTGCATGGCCATGCAATACCACTCCTATGTTCGCGACGGAATAA 507 0.5444 MLSTLPPSDPFLNNPFWALDGSFPTPWEGPGFSPSLLSSPVKPVGKSQTHAGSDADVKHVASSILDERKRRRMISNRESARRSRMRKQKHLENLRSQVTRFRIQNRELNNRLQFLLHHYNRVITENQWLRSEQTQLRQKLHDITQILALQPFSSSAWPCNTTPMFATE 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5227g00045 168 SMART brlzneu 64 128 IPR004827 GO:0003700|GO:0006355
Pral5227g00045 168 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 71 86 IPR004827 GO:0003700|GO:0006355
Pral5227g00045 168 SUPERFAMILY Leucine zipper domain 68 119 IPR046347 GO:0003700|GO:0006355
Pral5227g00045 168 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 66 115 IPR004827 GO:0003700|GO:0006355
Pral5227g00045 168 PANTHER BZIP TRANSCRIPTION FACTOR 44 46 150 - -
Pral5227g00045 168 Gene3D - 66 120 - -
Pral5227g00045 168 CDD bZIP_plant_GBF1 69 120 IPR045314 GO:0003700|GO:0006355
Pral5227g00045 168 Coils Coil 77 111 - -
Pral5227g00045 168 Pfam bZIP transcription factor 68 119 IPR004827 GO:0003700|GO:0006355
Pral5227g00045 168 FunFam BZIP transcription factor 66 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5227g00045 Pral-Chr5227 419142 420052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5227g00045 21 153 bZIP Transcription Factor Family AT3G30530 41.549 1.82e-23 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral5227g00045 bZIP_1 1.6e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5227g00045 - - qsa:O6P43_024519 169.859