Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5227g00041 ATGTATGAAAGCATTGAAGATTTTCTGCAAAGCGACAACAACATCATCCCTATAAGGTACTCCTATAGAAAAATCAAAAAGATGACAAAAGGGTTTAAAATAAGACTTGGGAAAGGAGGCTATGGCTCTGTTTTCAAAGGACAACTTCGAAGTCGTCGTGATGTAGCTGTCAAGATGTTGGATAAGGCTGAAGCCAATGGTCAGGATTTCATCAACGAGGTTGCAACACTTGGTAGAATCCACCATGTTAATGTTGTGCAACTCATTGGTTATTGTGTGGAAGGATCAAAGCGTGCTCTTGTGTATGAGTTCATGAAGAATGGGTCTCTTGACAAATACATTCTCTGTAAACCTAATCACAATGAGCAATCCTTGAATCTTCATCAATTGTATGCCATTTCTCTAGGAGTAGCTCGTGGTATTGAATATCTTCACAACGGGTGTGATATGCAAATTCTGCATTTTGATATAAAGCCGCACAACATCCTTCTTGATGACAACTTCACCCCAAAGGTTTCTGATTTTGGGCTTGCTAAACTCTATCCTACAAATGATAGTATTGTGTCTCTTACAGCAGCAAGAGGAACCATAGGATACATGGCTCCTGAGCTCTTCTACCAAAATGTAGGTGGAGTCTCCTATAAAGCTGATGTGTATAGCTTTGGGATGTTATTAATGGAGATGGCTGGTAGAAGGAAGAATCTGAATGCGTTGGCTGAGAAATCAAGTCAATTTTATTTTCCTTTTTGGGCTCATGATCAGTTAAATGAAGGGAATGAAATTACCATAGCAGATGCAACAGAGGAAGAAATGAAAGTGGCAAGGAAAATGCTGATCGTTGGGTTGTGGTGCATTCAAACCAAGCCTAGCGACCGTCCTTCAATGAACAGAGTTATGGAGATGCTTGAGGGAGACGAGCAAGACTTGGAATTGCCTCAAAAGCCTTATCTATATCCAGAAGAGTTACCAGTAAGGGATGATATTGCATATTCAACACGACGATCCAACTCATCAAGCAATCATCCTTCGATGGAAAAGGCTCTTGAAGCAGGGGAGCAAGAGTCAGTATTGCCTCAGCAGTCTTTTCTATATGCACAAGATTCACCAACAATTGATGTTAGTGCTCATTTACGTTCAACGCCTAAATCCTCTGATCCTTCACCAAACGGTCAAAAGGAAGATTTTCTAGGCAAATTCTTGATTATACGAAATACATGTTTGGAAGGACTTTTATATGTCTTTCAGGAGTTGAGATTACTAATTACTCTTCATTTTGGGATCTTCATGATAAGGGACATGTTTTCCTCATCAACACAATTACCAGTAGCTCTGTTTCTGATTATGGCATTATGCAGAACTTGCAACGCATCAGATGGACAGCAGACCTGTTCTAGTCTGTGTGGAGATCACAACATTAGGAGCCCTTTTCGGCTAAAAGACTCTCCAGAGCAGTGTGGTGATCAAAGGTACAACCTTTCTTGCGAGCAAAACCAACTGGTAATGTACTGGCAATCTGGGAGATACAGTGTTTTGTCCATTGATTATGAGAACTACACAATCCGATTAAGGGATGCTAATATTGTGGAGTTCGATTCCTCTTCCCTCCCTGAGTATTCTTTGACAGACTACAACTTTAGCAAATCATATCCATATACCTCCACCATTGATGGACCCAACAAAAATGGAGATTTGTTGTGGTATGAATTGTACACAAGTATGATGATGATATACGTAAGTTGTGAACACCCTCTAGATTCCCCTGGCTTTGTGGACACAGCGCCTTGCTTCAAAACTTCAAATGGCTCTGTAGCTTCTTCTTCTTCTTCTTCATCGAATTTGTATGCCTGTGTTGGGATGGGAATTGTAGCGTATGCGGCGTTAGATGACAATTGCCGTATAGAAATGATGTATATGACATCGTGGCCTGCTCTGAAGAACAACCAGTCTTGGTCCTGCACGGACATCCACAATATGCTTCTTTATGGCTTTGAACTTTCTTGGCTCAAAAGTCACTCGGAGAATAGCATTTTTGAAATGATCCTTCGGAGCATCCTGAACTATAGGATATACTTCGCTCTGTCTGTGTTAGCTTATATTGGAGCTAAATTTGTTTTGGCGACTCCATTTCTCCTTGGCCTGTTGATCTATAAATGGCGACGAAGACATTTATCAGTGTTTGACAACATTGAAGATTTTCTGCAAAGTGAGAACAACATCATCCCTATAAGGTACTCCTACAATGACCTCAAGAAGATGACAAATGGGTTTAAAGTAAGACTTGGGAAGGGAGGCTATGGCTCCGTTTTCAAAGGACAACTTCGAAGTGGTCGTGACGTGGCTGTCAAGATGTTGAATAATGCCAAAGCCAATGGTCAGGATTTCATAAACGAAGTTGCTACCGTTGGTAGAATCCACCATGTTAATGTGGTGCAACTCATAGGTTATTGTGTGGAAGGATCAAATCATGCTATTATATATGAATTCATGAAAAATGGATCTCTCGACAAATACATTCTGTCTAAACCTAATCATTATGATCAATCCTTGAATCTTCATCAATTGTATGCCATTTCTCTTGGAGTAGCTCGTGGTATTGAATATCTTCACAAAGGGTGTGATGTGCAAATTCTGCATTTTGATATAAAGCCGCCCAACATCCTTCTTGATGACAACTTCATCCCAAAAGTCTCTGATTTTGGCCTTGCTGGACTCTATCCTACAAATAATAGCATTGTGCCTCTTACAACAGGTGGGGGAACTATAGGATACATGGCTCCTGAACTATTCTACAGAAATGCAGGAGGAGTCTCTTGCAAAGCCGATGTTTATAGTTTTGGGAAGCTATTGATGGAAATTGCTGGTAGAAGGAAGAATTTGAGTGCATTGACTGAAGAATCTAGTCAATTTTACTTTCCCTTTTGGGTATATGATCAACTAAACGAAGGAAATGAAATCGACATAGCAGATACAACAGAGGAAGAAATGAAAGTGGCAAGGAAAATGATGATCGTTGGGCTGTGGTGCATTCAGACCAAGCCTAGTGATCGTCCTTCAATGACCAAGGTTGTGGAGATGCTTGAGAGAGATGAGCAAGACTTAGAATTGCCTCAAAAGCCTTATGGTTATCCACAAGATTTACCAGCAAGGGATGATAGTGATCTTTCAAGTCCAATATGGGGGTTCAAGCCAAGCAATCATCCTTCACCGAGCAAAGATGTAGAGATGCTTGAAGGAGAGGAGCAAGAGCAAGATTCGCCAACAAATGATGTTGATGATCATTTCTGTTCACCGCCTCCAGTGAAGAATAATCCTAAAGAAACAACTACATTTTTAAGTAAAGAAGACGAGAGATCCATATAA 3360 0.4051 MYESIEDFLQSDNNIIPIRYSYRKIKKMTKGFKIRLGKGGYGSVFKGQLRSRRDVAVKMLDKAEANGQDFINEVATLGRIHHVNVVQLIGYCVEGSKRALVYEFMKNGSLDKYILCKPNHNEQSLNLHQLYAISLGVARGIEYLHNGCDMQILHFDIKPHNILLDDNFTPKVSDFGLAKLYPTNDSIVSLTAARGTIGYMAPELFYQNVGGVSYKADVYSFGMLLMEMAGRRKNLNALAEKSSQFYFPFWAHDQLNEGNEITIADATEEEMKVARKMLIVGLWCIQTKPSDRPSMNRVMEMLEGDEQDLELPQKPYLYPEELPVRDDIAYSTRRSNSSSNHPSMEKALEAGEQESVLPQQSFLYAQDSPTIDVSAHLRSTPKSSDPSPNGQKEDFLGKFLIIRNTCLEGLLYVFQELRLLITLHFGIFMIRDMFSSSTQLPVALFLIMALCRTCNASDGQQTCSSLCGDHNIRSPFRLKDSPEQCGDQRYNLSCEQNQLVMYWQSGRYSVLSIDYENYTIRLRDANIVEFDSSSLPEYSLTDYNFSKSYPYTSTIDGPNKNGDLLWYELYTSMMMIYVSCEHPLDSPGFVDTAPCFKTSNGSVASSSSSSSNLYACVGMGIVAYAALDDNCRIEMMYMTSWPALKNNQSWSCTDIHNMLLYGFELSWLKSHSENSIFEMILRSILNYRIYFALSVLAYIGAKFVLATPFLLGLLIYKWRRRHLSVFDNIEDFLQSENNIIPIRYSYNDLKKMTNGFKVRLGKGGYGSVFKGQLRSGRDVAVKMLNNAKANGQDFINEVATVGRIHHVNVVQLIGYCVEGSNHAIIYEFMKNGSLDKYILSKPNHYDQSLNLHQLYAISLGVARGIEYLHKGCDVQILHFDIKPPNILLDDNFIPKVSDFGLAGLYPTNNSIVPLTTGGGTIGYMAPELFYRNAGGVSCKADVYSFGKLLMEIAGRRKNLSALTEESSQFYFPFWVYDQLNEGNEIDIADTTEEEMKVARKMMIVGLWCIQTKPSDRPSMTKVVEMLERDEQDLELPQKPYGYPQDLPARDDSDLSSPIWGFKPSNHPSPSKDVEMLEGEEQEQDSPTNDVDDHFCSPPPVKNNPKETTTFLSKEDERSI 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5227g00041 1119 SUPERFAMILY Protein kinase-like (PK-like) 733 1028 IPR011009 -
Pral5227g00041 1119 ProSitePatterns Serine/Threonine protein kinases active-site signature. 876 888 IPR008271 GO:0004672|GO:0006468
Pral5227g00041 1119 PANTHER RUST RESISTANCE KINASE LR10-RELATED 4 331 IPR045874 GO:0004672
Pral5227g00041 1119 MobiDBLite consensus disorder prediction 1030 1119 - -
Pral5227g00041 1119 FunFam serine/threonine-protein kinase PBS1-like 3 104 - -
Pral5227g00041 1119 ProSitePatterns Protein kinases ATP-binding region signature. 760 782 IPR017441 GO:0005524
Pral5227g00041 1119 Pfam Protein tyrosine and serine/threonine kinase 758 1026 IPR001245 GO:0004672|GO:0006468
Pral5227g00041 1119 Pfam Protein tyrosine and serine/threonine kinase 34 302 IPR001245 GO:0004672|GO:0006468
Pral5227g00041 1119 ProSiteProfiles Protein kinase domain profile. 754 1033 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5227g00041 1119 ProSiteProfiles Protein kinase domain profile. 30 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5227g00041 1119 FunFam serine/threonine-protein kinase PBS1-like 727 828 - -
Pral5227g00041 1119 FunFam PR5-like receptor kinase 829 1037 - -
Pral5227g00041 1119 Pfam Wall-associated receptor kinase galacturonan-binding 463 524 IPR025287 GO:0030247
Pral5227g00041 1119 MobiDBLite consensus disorder prediction 332 351 - -
Pral5227g00041 1119 Gene3D Transferase(Phosphotransferase) domain 1 105 314 - -
Pral5227g00041 1119 FunFam PR5-like receptor kinase 105 313 - -
Pral5227g00041 1119 Gene3D Phosphorylase Kinase; domain 1 9 104 - -
Pral5227g00041 1119 Gene3D Phosphorylase Kinase; domain 1 731 828 - -
Pral5227g00041 1119 SMART serkin_6 754 1026 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5227g00041 1119 SMART serkin_6 30 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5227g00041 1119 Gene3D Transferase(Phosphotransferase) domain 1 829 1040 - -
Pral5227g00041 1119 SUPERFAMILY Protein kinase-like (PK-like) 12 304 IPR011009 -
Pral5227g00041 1119 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Pral5227g00041 1119 ProSitePatterns Protein kinases ATP-binding region signature. 36 58 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5227g00041 Pral-Chr5227 382497 395394 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5227g00041 19 328 Receptor kinase-like Gene Family AT5G38280 50.789 1.17e-99 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral5227g00041 PK_Tyr_Ser-Thr 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5227g00041 - - pcin:129310315 909.442