Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5227g00040 ATGTTCCTCCACCAATTTGCTGTTCTTGAGCTACCTCCTTCAATCAAACTCAACGTCAAACACATTGATTACACTTCCCAAACTGTTCAGCTCTATGATCCTCATGGTTGCCTCTCTCTGCATCTCCCTAGTCTCACTCTTCCTCCTCCTTCCCCTTTCCAGCTGCAAGCCAGCTTGTTTCTTGATGATGATGATGATGATGACTTCACTGTCTTCAATTGCTCACAGCCGAAAAGCTCCGAGGACGTGAAATTAATCTCAACTTGCCAGCGCAGATCTACCTATCACGTATATGCCATTTCATCAAGTGCATACATCAGACAATTTCAGTTGCTGTCTTGCACCAAAGTATTTAACATTTCATCCGTCCCAGGGAAGATATTTAGAGATGATTACAGTCTTCATCTGAAGTGGTCTAATCCTAGGTGTAAACATTGCGAATCATCGGGAAGAAGGTGCAGGTTCAAGAATAGCAGCATTAGTAATGAAACTGCATGCTTTGAAATAGGTATGATCTGGTCTACTTTCTCAACAAATCCAAATGTCAGACCATACCATGGATTCATTCATATAATTGTCGCTTCTAATAGATATACAAATTCACATGAACATGGAAAGCATTAA 624 0.4087 MFLHQFAVLELPPSIKLNVKHIDYTSQTVQLYDPHGCLSLHLPSLTLPPPSPFQLQASLFLDDDDDDDFTVFNCSQPKSSEDVKLISTCQRRSTYHVYAISSSAYIRQFQLLSCTKVFNISSVPGKIFRDDYSLHLKWSNPRCKHCESSGRRCRFKNSSISNETACFEIGMIWSTFSTNPNVRPYHGFIHIIVASNRYTNSHEHGKH 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5227g00040 207 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 7 169 IPR046948 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5227g00040 Pral-Chr5227 352830 353453 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5227g00040 7 167 C3H Transcription Factor Family AT2G25410 29.714 3.90e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5227g00040 - - pcin:129311479 167.162