Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5227g00039 ATGTATACTGGAGGTAAATTTGTGCTGGGGGCTCCTTTTGTCATTGCCCTTTTGATCTATAAATGCCGACGAAGGCACTTATCAATGTATGAAAGCATTGAAGATTTTCTGCAAAGCGACAACAACATCATCCCTATAAGGTACTCCTACAATGACATCAAGAAGACGACAAAAGGATTTAAAATAAGACTTGGAAAAGGAGGCTATGGCTCTGTGTTCAAAGGACAACTTCGAAGTGGTCGTGATGTGGCTGTCAAGATGTTGGATAATGCGGAAGCCAATGGTCAGGATTTCATCAACGAGGTTGCAACACTTGGTAGAATCCACCATGTTAATGTTGTGCAACTCATAGGTTATTGTGTGGAAGGATCAAAGCGTGCTCTTGTATATGAGTTCATGAAAAATGGGTCTCTTGACAAATACATTCTCTCTAAACCTAATGATAATGAGCAATCCTTGAATCTTCATCAATTGTATGCCATTTCTCTCAGAGTAGCTCGTGGTATTGAATATCTTCACAAAGGGTGCAATATGCAAATTCTTCATTTTGATATAAAGCCGCACAACATCCTTCTTGATGACAACTTCATCCCAAAGGTTTCTGATTTTGGGCTTGCTAAACTCTATCCTACAAATGATAATATTATGTCTCTTACAGCAGCAAGAGGAACTATAGGATACATGGCTCCCGAGCTCTTCTACAAAAATATAGGTGGAGTCTCCTATAAGGCTGATTTGTATAGCTTTGGGATGTTATTAATGGAGATGGCTGGTAGAAGGAAGAATCTGAATGTGTTGGCTGAGCAATCAAGTCAATTTTATTTTCCTTTTTGGGCTTATGATCAGTTAAATGAAGGGAATGAAATTACCATAGCAGATGCAACAGAGGAAGAAATGAAAGTGGCAAGGAAAATGCTGATCGTTGGGTTGTGGTGCATTCAAACCAAGCCTAGCGATCGTCCTTCAATGAACAGAGTTGTGGAGATGCTTGAGGGAGACGAGCAAGACTTGGAATTACCTCAAAAGCCTTATCTATATCCAAAAGAGTTACCAGCAAGGGATGATAATGCATATTCAACACAACGATCCAACTCATCAAGCAATCATCCTTCAAGGGAAAAGGCTTTTGAAGCAGAGGAGCAAGAGTCAGTATCGCCTCAGCAGTCTCTTCTATATACACAAGATTCACCAACAATTGATGTTAGTGCTCATTTACTTTCAACGCCTAGATCCTCTGATCCTTTAGTGAATAATCCTAAAGAGACAACCTCATTTTTAACTAAACCGAACAGGAAGGAAATTGAACCATTTAAAGTGCTAAATCTTTAA 1329 0.3935 MYTGGKFVLGAPFVIALLIYKCRRRHLSMYESIEDFLQSDNNIIPIRYSYNDIKKTTKGFKIRLGKGGYGSVFKGQLRSGRDVAVKMLDNAEANGQDFINEVATLGRIHHVNVVQLIGYCVEGSKRALVYEFMKNGSLDKYILSKPNDNEQSLNLHQLYAISLRVARGIEYLHKGCNMQILHFDIKPHNILLDDNFIPKVSDFGLAKLYPTNDNIMSLTAARGTIGYMAPELFYKNIGGVSYKADLYSFGMLLMEMAGRRKNLNVLAEQSSQFYFPFWAYDQLNEGNEITIADATEEEMKVARKMLIVGLWCIQTKPSDRPSMNRVVEMLEGDEQDLELPQKPYLYPKELPARDDNAYSTQRSNSSSNHPSREKAFEAEEQESVSPQQSLLYTQDSPTIDVSAHLLSTPRSSDPLVNNPKETTSFLTKPNRKEIEPFKVLNL 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5227g00039 442 MobiDBLite consensus disorder prediction 405 429 - -
Pral5227g00039 442 Gene3D Transferase(Phosphotransferase) domain 1 133 342 - -
Pral5227g00039 442 Gene3D Phosphorylase Kinase; domain 1 23 132 - -
Pral5227g00039 442 FunFam PR5-like receptor kinase 133 341 - -
Pral5227g00039 442 ProSiteProfiles Protein kinase domain profile. 58 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5227g00039 442 FunFam serine/threonine-protein kinase PBS1-like 28 132 - -
Pral5227g00039 442 SUPERFAMILY Protein kinase-like (PK-like) 40 332 IPR011009 -
Pral5227g00039 442 MobiDBLite consensus disorder prediction 356 371 - -
Pral5227g00039 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Pral5227g00039 442 SMART serkin_6 58 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5227g00039 442 MobiDBLite consensus disorder prediction 405 425 - -
Pral5227g00039 442 ProSitePatterns Protein kinases ATP-binding region signature. 64 86 IPR017441 GO:0005524
Pral5227g00039 442 Pfam Protein tyrosine and serine/threonine kinase 62 330 IPR001245 GO:0004672|GO:0006468
Pral5227g00039 442 PANTHER RUST RESISTANCE KINASE LR10-RELATED 30 359 IPR045874 GO:0004672
Pral5227g00039 442 MobiDBLite consensus disorder prediction 355 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5227g00039 Pral-Chr5227 347133 352633 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5227g00039 9 363 Receptor kinase-like Gene Family AT5G38260 47.802 1.32e-108 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral5227g00039 PK_Tyr_Ser-Thr 2.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5227g00039 - - pcin:129310315 681.789