Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5227g00038 ATGGAAACTTTACCTGTAAACTCCTTCTTCCCCTTATGTTTCTTGCTAATTCTTTTGTTTTCAGAGTCTGTAGGAAGTTGGAATAGCTGTCCAGAACCTGAAACATCATGTGGGAAACTTCCTGTTCGGTTTCCTTTCCGAGTAAAAGGACACCAATCAAAACAGTGCGGCTATCCTGGGTTTGATTTAGAATGTTCTTCTGCCAAACATGCTGTTCTTGAGCTTCCTGGATCAGTCAAGCTTAATGTCAAACGTATTGATTACAAATCCCAAACCATTCAGTTATATGATCCTTCTGGTTGCCTTTTAAGGCATGTCCGTTATCTCACTCTACTTCATTCCCCTTTCCAGTTCATAGACCGCTATCTTTATGACTTTACAATTTTCAATTGCTCGTCACCAAGGGACATAATACTACATTCAAGGTGTCTAAGCGGCTCAACCTATCAAGTATATGCCGTTTATTCTGATGAGGATATCGAAGTGCTTCCCTTATTTTGCAAAAAAATATTCAACGTTTCATCCATCCCATTTGACATTATTGAGCATGATGATAATAGCACTCTTTATTTGATGTGGTCTCATCCAATGTGTGAACATTGTGAATTAAAGGGAACAAGATGTGGATTCAAGGATATCACAACAAGGAATAATACTACCAGTTATGATACTACGTGTTTAGAGGTTCGTCACAAAGGCTTATCAAACAAATTTGTAATTACAGGATCAATCTTGGGCTCACTTCTTCTAGTGTTGACCCCTGTTGTAATTCATTATGTTTGCAACTCTTACAAATCAAGGAAAGAAAGCCAAGCAATAATTGAAAAGTTTCTCAAGGATTATAGAGCTCGCAAGCCAACTCGATATTCTTATGCTGAAATCAAGAGGATTACCAATCACTTTGAAGTAAAGTTAGGGGAAGGATCTTTCGGTACAGTGTTCAAAGGAAACGTTTCATCTGAGTTCGAAGTTGCAGTTAAGATCCTCACTAATTCTGAAGGAAATGGTGAAGAGTTCATCACTGAAGTTGGAACAATGGGCAAAATCCATCATGTCAACATTATTCGCTTAATGGGCTTTTGTGCTGATGGCTTTAGAAGAGCACTAGTTTACGAATACTTTCCAAATGGTTCCTTACAAAATTTCATAAATTCATTAGACAAAAGCCAAAACTTTGTTGGTTGGAAAAAGCTTCATGAAATTGCTTTAGGTATAGCCAAAGGAATTGAGTATCTTCATCAAGGGTGCGAGCAACGCATACTTCATTTTGACATCAAACCTCACAATATTTTATTGGATGATGACTTCACTCCAAAAATATGTGATTTTGGACTGGCCAAATTGTGTTCCAAAGATCAAAGCATAGTGTCAATGACTAACGCCAGAGGAACATTGGGTTACATTGCTCCAGAAGTCTTCTCACGAAATTTTGGAAATGTATCTCACAAAGCAGATGTTTATAGTTTTGGGATGTTGCTACTTGAATTAATAGGAGGAAGAAGGATCACCCATGACACAACAGAAAATGCTCCCCACATTCACTATCCCGAATGGATCTATAATATTTTAGAAGAAAGGGAGGATGTAAGGATACATATAGACGAAGACAGTGATGCTAAAACTGTAAAAAAATTGGGAATAGTGGGACTGTGGTGCATTCAATGGCATCCTGTGGATCGACCATCAATGCAAGTAGCGGTTCAAATGTTAGAAGGAGAAGGAGACAAATTACCAATACCTTCTAATCCTTTTAATTCTGAAGGTACATCAACAAGAAAAAGGTCCAGCGTGCCTACAAGAAGTCTGATGCAGGGTTTAGAAATAATCCAAGAAGTAGAGTGA 1842 0.3795 METLPVNSFFPLCFLLILLFSESVGSWNSCPEPETSCGKLPVRFPFRVKGHQSKQCGYPGFDLECSSAKHAVLELPGSVKLNVKRIDYKSQTIQLYDPSGCLLRHVRYLTLLHSPFQFIDRYLYDFTIFNCSSPRDIILHSRCLSGSTYQVYAVYSDEDIEVLPLFCKKIFNVSSIPFDIIEHDDNSTLYLMWSHPMCEHCELKGTRCGFKDITTRNNTTSYDTTCLEVRHKGLSNKFVITGSILGSLLLVLTPVVIHYVCNSYKSRKESQAIIEKFLKDYRARKPTRYSYAEIKRITNHFEVKLGEGSFGTVFKGNVSSEFEVAVKILTNSEGNGEEFITEVGTMGKIHHVNIIRLMGFCADGFRRALVYEYFPNGSLQNFINSLDKSQNFVGWKKLHEIALGIAKGIEYLHQGCEQRILHFDIKPHNILLDDDFTPKICDFGLAKLCSKDQSIVSMTNARGTLGYIAPEVFSRNFGNVSHKADVYSFGMLLLELIGGRRITHDTTENAPHIHYPEWIYNILEEREDVRIHIDEDSDAKTVKKLGIVGLWCIQWHPVDRPSMQVAVQMLEGEGDKLPIPSNPFNSEGTSTRKRSSVPTRSLMQGLEIIQEVE 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5227g00038 613 SMART serkin_6 299 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5227g00038 613 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
Pral5227g00038 613 MobiDBLite consensus disorder prediction 576 599 - -
Pral5227g00038 613 ProSitePatterns Protein kinases ATP-binding region signature. 305 327 IPR017441 GO:0005524
Pral5227g00038 613 FunFam serine/threonine-protein kinase PBS1-like 266 373 - -
Pral5227g00038 613 Gene3D Phosphorylase Kinase; domain 1 273 373 - -
Pral5227g00038 613 FunFam PR5-like receptor kinase 374 581 - -
Pral5227g00038 613 SUPERFAMILY Protein kinase-like (PK-like) 283 571 IPR011009 -
Pral5227g00038 613 Pfam Protein kinase domain 301 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5227g00038 613 Pfam Wall-associated receptor kinase galacturonan-binding 30 97 IPR025287 GO:0030247
Pral5227g00038 613 Gene3D Transferase(Phosphotransferase) domain 1 374 577 - -
Pral5227g00038 613 ProSiteProfiles Protein kinase domain profile. 299 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5227g00038 613 PANTHER RUST RESISTANCE KINASE LR10-RELATED 270 589 IPR045874 GO:0004672
Pral5227g00038 613 MobiDBLite consensus disorder prediction 582 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5227g00038 Pral-Chr5227 344252 346696 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5227g00038 33 583 Receptor kinase-like Gene Family AT5G38260 36.224 7.64e-105 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral5227g00038 Pkinase 3.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5227g00038 - - qsa:O6P43_019907 693.345