Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5227g00037 CATACTCTTGGTAAAATTGTTCTGGGGACTCCATTTGTCATTGCCCTTTTGATCTATAAATGTCTGCGGAGACATTTATCAATGTATGACAACATTGAAGAATTTTTGCAAAGTGACAACAATATCATGCCTATAAGATACTCCTATGGAGAAATCAAGAAGATGACAAAAGGGTTTAAAATCAAACTTCAGAAAGGAGGTTATGGCTTTGTGTTCAAAGGCCAACTTCAAAGTGGTCGTGAGGTAGCTGTCAAGATGGTGGATAAGGCCAAAGCTGATAATCAAGAATTCATAAATGAAGTTGCTACACTTGGTATAATCCACCATATGAATGTTGTGCAACTCATTGGTTACTGTGTTGAGGGATTGAAACGTGCTCTTATATATGAGTTCAGGCAAAATGGATCTCTCGACAAATACATTTTCTCTAAACACGATAATGAGCAATCCTTCGATCTTCATCAATTGTATGCCATTTCTGTTATAGTAGCTCATGGTATTGAATATCTTCACAAAGGTTGCAACATGCAAATTCTGCATTTTGATATAAAGCCACACAACATCCTTCTTGATGACAACTTCATCCCTAAGGTTTCTGATTTTGGCCTTGCTAAACTCTACCCTACTAGTGATAGCATTGTGTCACTCACAACTATAAGAGGTACGATAGGATACATGGCCCCTGAACTTTTCTATAGAAACGTGGGTGGAATCTCTAACAAAGCGGATGTGTATAGTTTTGGGAAGTTATTAATGGACATTGCTGGTAGAAGAAAGAATCCAAATGTGTCAGCTGCACAGTCAAGTCATTTTTACTTCCCCTTCTGGGTTTATGATCAATTAAATGAAGGAAATGAAATTAACATAGAAAATGCAACAGAAGAAGAAAGGAAGTTGGCAAGGAAAATGATGATTGTGAGACCATGGTGCATCCAAACTAGGCCAAATGATCGTCCTTCAATGAACAAAGTTGCAAAGATGCTTGAGGGGGAGGAGCATGACTTAGAAATGCCTCAAAAGCCTTATTTTTATCCACAAGATATTCCGAATGTGGATGTTAGTAACCATTCAAATTCGATAATGTCATCCTCTGATCTATCAGTAAGTAATTATACAGATACAACATCATTTTCAGCTCAAGAAGATGAAAGATCATCATAG 1161 0.3721 HTLGKIVLGTPFVIALLIYKCLRRHLSMYDNIEEFLQSDNNIMPIRYSYGEIKKMTKGFKIKLQKGGYGFVFKGQLQSGREVAVKMVDKAKADNQEFINEVATLGIIHHMNVVQLIGYCVEGLKRALIYEFRQNGSLDKYIFSKHDNEQSFDLHQLYAISVIVAHGIEYLHKGCNMQILHFDIKPHNILLDDNFIPKVSDFGLAKLYPTSDSIVSLTTIRGTIGYMAPELFYRNVGGISNKADVYSFGKLLMDIAGRRKNPNVSAAQSSHFYFPFWVYDQLNEGNEINIENATEEERKLARKMMIVRPWCIQTRPNDRPSMNKVAKMLEGEEHDLEMPQKPYFYPQDIPNVDVSNHSNSIMSSSDLSVSNYTDTTSFSAQEDERSS 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5227g00037 386 Coils Coil 282 302 - -
Pral5227g00037 386 SMART serkin_6 57 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5227g00037 386 FunFam PR5-like receptor kinase 132 340 - -
Pral5227g00037 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
Pral5227g00037 386 ProSiteProfiles Protein kinase domain profile. 57 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5227g00037 386 Gene3D Phosphorylase Kinase; domain 1 23 131 - -
Pral5227g00037 386 Pfam Protein tyrosine and serine/threonine kinase 61 328 IPR001245 GO:0004672|GO:0006468
Pral5227g00037 386 SUPERFAMILY Protein kinase-like (PK-like) 37 331 IPR011009 -
Pral5227g00037 386 Gene3D Transferase(Phosphotransferase) domain 1 132 340 - -
Pral5227g00037 386 PANTHER RUST RESISTANCE KINASE LR10-RELATED 29 354 IPR045874 GO:0004672
Pral5227g00037 386 MobiDBLite consensus disorder prediction 362 386 - -
Pral5227g00037 386 FunFam serine/threonine-protein kinase PBS1-like 27 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5227g00037 Pral-Chr5227 319564 320724 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5227g00037 7 358 Receptor kinase-like Gene Family AT1G66910 44.780 5.69e-100 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral5227g00037 PK_Tyr_Ser-Thr 3.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5227g00037 - - pcin:129310315 553.903