Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5227g00036 ATGTATGAAAGCATTGAAGATTTTCTGCAAAATGACAACAACATCATCCCTATAAGGTACTCCTACAATGACATCAAGAAGATGACAAAAGGATTTAAAATAAGACTTGGGAAAGGAGGCTATGGCTCTGTGTTCAAAGGACAACTTCGAAGTGGTCGTGATGTGGCTGTCAAGATGTTGGATAAGGCTAAAGCCAATGGTCAGGATTTCATCAACGAGGTTGCAACACTTGGTAGAATCCACCATGTTAATGTTGTGCAACTCGTAGGTTATTGTGTGGAAGGATCAAAGCGTGCTCTTGTATATGACTTCATGCAAAATGGGTCTCTTGACAAATACATTCTCTCTAAACCTAATGACAATGAGCAATCCTTGAATCTTCATCAATTGTATGCCATTTCTCTTGGAGTAGCTCGTGGTATTGAATATCTACATAAAGGGTGTGATATGCAAATTCTGCATTTTGATATAAAGCCGCACAACATCCTTCTTGATGGCAACTTCATCCCAAAGGTTTCTGATTTTGGCCTTGCTAAACTTTACCCGACAAATGATAGCATTGTGTCTCTTACGGCAGCAAGGGGAACTATAGGATACATGGCTCCTGAACTTTTCTACCAAAATGTAGGTGGAGTCTCCTATAAGGCTGATGTGTATAGCTTTGGGATGTTATTAATGGAGATGGCTGGTAGAAGGAAGAATCTGAATGTGTTGGCTGAGCAATCAAGTCAATTTTATTTTCCTTTTTGGGCTTATGATCAGTTAAATGAAGGGAATGAAATTAGCATAGCAGATGCAACAGAGGAAGAAATGAAAGTGGCAAGGAAAATGCTTATCGTTGGGTTGTGGTGCATTCAAACCAAGCCTAGCGACCGTCCTTCAATGAACAGAGTTATGGAGATGCTTGAGGGAGACGAGCAAGACTTGGAATTGCCTCAAAAGCCTTATCTATATCCAGAAGAGTTACCAGCAAGGGATGAGAATGCATATTCAACACGACGATCCAACTCATCAAGCAATCATCCTTCAAGGGAAAAGGCTCTTGAAGCAGAGGAGCAAGAGTCAGTATCGCCTCAGCAGTCTCTTCTATGTACACAAGATTCACCAACAATTGATGTTAGTGCTCATTTACGTTCAACGCCTAGATCCTCTGATCCTTTAGTGAATAATCCTAAAGAGACAACCTCATTTTTAACTAAAAATGATGAGAGATCAATATAG 1221 0.4021 MYESIEDFLQNDNNIIPIRYSYNDIKKMTKGFKIRLGKGGYGSVFKGQLRSGRDVAVKMLDKAKANGQDFINEVATLGRIHHVNVVQLVGYCVEGSKRALVYDFMQNGSLDKYILSKPNDNEQSLNLHQLYAISLGVARGIEYLHKGCDMQILHFDIKPHNILLDGNFIPKVSDFGLAKLYPTNDSIVSLTAARGTIGYMAPELFYQNVGGVSYKADVYSFGMLLMEMAGRRKNLNVLAEQSSQFYFPFWAYDQLNEGNEISIADATEEEMKVARKMLIVGLWCIQTKPSDRPSMNRVMEMLEGDEQDLELPQKPYLYPEELPARDENAYSTRRSNSSSNHPSREKALEAEEQESVSPQQSLLCTQDSPTIDVSAHLRSTPRSSDPLVNNPKETTSFLTKNDERSI 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5227g00036 406 SUPERFAMILY Protein kinase-like (PK-like) 13 304 IPR011009 -
Pral5227g00036 406 Pfam Protein tyrosine and serine/threonine kinase 34 302 IPR001245 GO:0004672|GO:0006468
Pral5227g00036 406 PANTHER RUST RESISTANCE KINASE LR10-RELATED 4 331 IPR045874 GO:0004672
Pral5227g00036 406 SMART serkin_6 30 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5227g00036 406 Gene3D Phosphorylase Kinase; domain 1 9 104 - -
Pral5227g00036 406 FunFam serine/threonine-protein kinase PBS1-like 2 104 - -
Pral5227g00036 406 FunFam PR5-like receptor kinase 105 313 - -
Pral5227g00036 406 MobiDBLite consensus disorder prediction 329 343 - -
Pral5227g00036 406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Pral5227g00036 406 Gene3D Transferase(Phosphotransferase) domain 1 105 314 - -
Pral5227g00036 406 ProSiteProfiles Protein kinase domain profile. 30 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5227g00036 406 ProSitePatterns Protein kinases ATP-binding region signature. 36 58 IPR017441 GO:0005524
Pral5227g00036 406 MobiDBLite consensus disorder prediction 353 396 - -
Pral5227g00036 406 MobiDBLite consensus disorder prediction 327 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5227g00036 Pral-Chr5227 289831 291308 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5227g00036 20 318 Receptor kinase-like Gene Family AT5G39030 52.475 1.76e-109 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral5227g00036 PK_Tyr_Ser-Thr 7.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5227g00036 - - pcin:129310315 646.351