Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5227g00035 ATGGAAACTGCAGTCGTAAACTCCTTCTTCTCTGTATGCTTGTTGCTAACTCTCATGTTTTTGGGGTCTGTAGGAAGCTCGAATAGCTGTCCAGAACCTGAAACATCATGTGGAAAACTTCCTGTTCGGTTTCCTTTCCGAGTAAAAAGACGCCAACCAGAACAATGCGGCTATCCTGGGTTTGATTTAGAATGTTCTTCTACCAAACATGCTGTTCTTGAGCTTCCTGGATCAGTCAAGCTCAGTGTCAAACATATTGATTACAAATCTCAAACCATTCAGTTATATGATCCTTCTGGTTGCCTTCCAAGGCATGTCCGCAATCTCACTCTAGTTCCTTCTCCTTTCCAGTTCATAGACCGAAATCTTAATGACTTTACAATTTTCAATTGCTCGTCGCCAAGAGATGGAGCGATTATTTCAACGTGCCTCAGCAGCTCTGCTTACCATGTGTATGCCGTTTTGTCTTATCGTGAGATTGGACAACTTACCTTGTTATTTTGCAGCAAAATATTTAACATTTCTTCTGTCCCACTTAAGATTTTTGATGTTGAGAACACTCTTCATTTGATGTGGTCTAATCCAATGTGCAAACATTGTGAATCAAATGGAACAAGATGTGGATTCAAGAATAGTAATATTCAACTATGA 651 0.3978 METAVVNSFFSVCLLLTLMFLGSVGSSNSCPEPETSCGKLPVRFPFRVKRRQPEQCGYPGFDLECSSTKHAVLELPGSVKLSVKHIDYKSQTIQLYDPSGCLPRHVRNLTLVPSPFQFIDRNLNDFTIFNCSSPRDGAIISTCLSSSAYHVYAVLSYREIGQLTLLFCSKIFNISSVPLKIFDVENTLHLMWSNPMCKHCESNGTRCGFKNSNIQL 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5227g00035 216 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 10 213 IPR046948 -
Pral5227g00035 216 Pfam Wall-associated receptor kinase galacturonan-binding 30 97 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5227g00035 Pral-Chr5227 251726 252376 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5227g00035 35 216 C3H Transcription Factor Family AT2G46495 34.328 4.19e-24 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5227g00035 - - pcin:129311479 236.884