Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5227g00034 ATGATGGGCTCACTTCTAGTGGTGAGTACTCTTGCGGCAATTCTTTATATCAGCAACTCTTATAAATCACGGAAAGAAAGCCAAGCAATAATTGAGAAGTTTTTGAAAGACTATAGAGCTCTCAAGCCCACCAGATATTCTTATGCTGAAATCAAGAGAATTACCAATCAGTTTGAAGTCAAGTTAAGGGAAGGGTCTTTCGGTATTGTGTTCAAAGGAAATATTTCATCTGAGTTCAAGGTTGTAGTGAAGATCCTCACTAATTCTAAAGGAAATGATGAAGAGTTCATCACTGAAGTTGGAACAATGGGTAAAATCCATCATGTCAACATTATTCGCTTAATGGGCTTCTGTGCTGATGGCTTTAGGAGAGCACTGGTTTACGAATACTTTCAAAATGGTTCATTACAAAATTTCATAAATTCACCAGGCAATAGGCAAAACTTTGTTGGATGGAAAAAGCTCTATGAGATTGCTTTAGGTACAACCAAAGGAATTGATTATCTTCATCAAGGCTGTGAGCAACGCATACTGCATTTTGACATCAAACCTCATAATATTCTATTGGATGATGACTTGACTCCAAAAATATGTGATTTGGGGTTGGCTAAACTGTGTTCCAAGGATCAAAGCATAGTGTCAATGACAAACGCTAGAGGAACATTGGGTTACATTGCTCTAGAAGTCTTCTCACGAAATTTTGGAAATATATCTCACAAAGCAGATGTTTATAATTTTGGAATGTTGCTACTTGAATTAATAGGAGGAAGAAGGATTACCCATGACACAAAAGAAAATGCTCCCCACATTTACTATCCCGAATGGATCTATAATATTTTTGAAGAAAAGGAGGATGTGAGGATTCATATTGAGGAAAAAGGGGATGCTAAAATTGCAAGAAAATTGGGAATGGTAGGCCTGTGGTGCATTCAATGGCATGCTGTGGATCGACCATCAATGCAAATAGTTCTTCAAATGTTGGAAGGAGAAGGAGACAGATTACCAATGCCTCCAAATCCTTTTAATTCTGATGGTCCTTCAACAAGAGAAAGGGCTAATGTACAAGCAAGAAATCTGATGCAAGGTTTAGCAATAATCCAGGAAGTAGAGTGA 1113 0.3756 MMGSLLVVSTLAAILYISNSYKSRKESQAIIEKFLKDYRALKPTRYSYAEIKRITNQFEVKLREGSFGIVFKGNISSEFKVVVKILTNSKGNDEEFITEVGTMGKIHHVNIIRLMGFCADGFRRALVYEYFQNGSLQNFINSPGNRQNFVGWKKLYEIALGTTKGIDYLHQGCEQRILHFDIKPHNILLDDDLTPKICDLGLAKLCSKDQSIVSMTNARGTLGYIALEVFSRNFGNISHKADVYNFGMLLLELIGGRRITHDTKENAPHIYYPEWIYNIFEEKEDVRIHIEEKGDAKIARKLGMVGLWCIQWHAVDRPSMQIVLQMLEGEGDRLPMPPNPFNSDGPSTRERANVQARNLMQGLAIIQEVE 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5227g00034 370 SUPERFAMILY Protein kinase-like (PK-like) 40 328 IPR011009 -
Pral5227g00034 370 ProSiteProfiles Protein kinase domain profile. 56 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5227g00034 370 FunFam serine/threonine-protein kinase PBS1-like 23 130 - -
Pral5227g00034 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Pral5227g00034 370 Gene3D Phosphorylase Kinase; domain 1 30 130 - -
Pral5227g00034 370 PANTHER RUST RESISTANCE KINASE LR10-RELATED 28 347 IPR045874 GO:0004672
Pral5227g00034 370 FunFam PR5-like receptor kinase 131 338 - -
Pral5227g00034 370 SMART serkin_6 56 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5227g00034 370 Gene3D Transferase(Phosphotransferase) domain 1 131 333 - -
Pral5227g00034 370 Pfam Protein kinase domain 61 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5227g00034 Pral-Chr5227 250162 251448 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5227g00034 1 340 Receptor kinase-like Gene Family AT1G66910 44.798 1.89e-103 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral5227g00034 Pkinase 7.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5227g00034 - - aprc:113873873 529.25