Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5227g00023 ATGTCCGTGTCCCCGAACCACCTAGTAAATCTTGACTTGTTCTGCAATGAAGCAGCTAGCGAGGTGGTTTCATCGGATTCCAATATTACCAACTGTGAATCATTGGCGGTTTCGAGTGTCCCATGGGATTCCGATGATGAAAGCTGTGTCTTAACCTTACTAGATTCCGAGGTTGATCAAGTACAGGAAAGACAACAGTCACTTGCACTGCTTCATGAAAAAGCATGGCTCAGAACTGCTCGAGAAGAAGCCATAAAGTGGATGCTGAAGGTGCAAGGTTACTACAGTTTTACACCAGGGACAGCATATCTATCTGTGAACTATCTTGATCGTTTTCTTTTGTCACACCCACTGCCGAAAGATGAAGCATGGCCTTTGCAGCTAGTGGCCGTTGCTTGCCTGTCTGTGGCGGCAAAAATGGAAGAAACAAGGGTGCCACTTTTAGTAGACTTACAAATGATAGAGCCTAGGTTCTTGTTTAAGCCTAAGACAGTTCAAAGAATGGAGCTTTTGGTTATGGCCGCTCTCAGGTGGCGATTGCGTGCTGTTACTCCTTTCGATTTCGCTCATCTTTTCATTGCTAAGGCCAAGCTATCATGCTCTGCCTCCTATCACATTATTTCTCGTGTCTCTGATATTCTAATCAGAACATGTTTAGTAACCGATTTCTTAGAGTACCCTCCATCTGCAATAGCGGCCGCTGCTCTGCTTTGGACAACCAATCAATATGTTGATGAACAGAATCTAAGCTTCTTCCACGAGAATATAAGCGGAGAGATGGTGCAGAAATGTTACAACCTCATGAAACAGAGGAGTTTCCGATCAGAACATTTTGCAGCAACGAATTTAGATTCATTGCCCCTAAGTCCTACTTGTGTGCTTGATCTTGCAGCTATGCAAGAAAGCAGCAAGGATCACAACCCGTGA 927 0.4444 MSVSPNHLVNLDLFCNEAASEVVSSDSNITNCESLAVSSVPWDSDDESCVLTLLDSEVDQVQERQQSLALLHEKAWLRTAREEAIKWMLKVQGYYSFTPGTAYLSVNYLDRFLLSHPLPKDEAWPLQLVAVACLSVAAKMEETRVPLLVDLQMIEPRFLFKPKTVQRMELLVMAALRWRLRAVTPFDFAHLFIAKAKLSCSASYHIISRVSDILIRTCLVTDFLEYPPSAIAAAALLWTTNQYVDEQNLSFFHENISGEMVQKCYNLMKQRSFRSEHFAATNLDSLPLSPTCVLDLAAMQESSKDHNP 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5227g00023 308 Gene3D - 72 181 - -
Pral5227g00023 308 SMART cyclin_7 86 174 IPR013763 -
Pral5227g00023 308 Pfam Cyclin, N-terminal domain 68 180 IPR006671 -
Pral5227g00023 308 CDD CYCLIN_AtCycD-like_rpt2 183 268 - -
Pral5227g00023 308 ProSitePatterns Cyclins signature. 81 112 IPR006671 -
Pral5227g00023 308 SUPERFAMILY Cyclin-like 165 267 IPR036915 -
Pral5227g00023 308 Gene3D - 182 265 - -
Pral5227g00023 308 SUPERFAMILY Cyclin-like 70 180 IPR036915 -
Pral5227g00023 308 SMART Cyclin_C_2 183 289 IPR004367 -
Pral5227g00023 308 FunFam D6-type cyclin 64 181 - -
Pral5227g00023 308 CDD CYCLIN_AtCycD-like_rpt1 80 178 - -
Pral5227g00023 308 Pfam Cyclin, C-terminal domain 183 272 IPR004367 -
Pral5227g00023 308 PANTHER CYCLINS 67 274 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5227g00023 Pral-Chr5227 202657 204399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5227g00023 1 269 Core Cell Cycle Gene Families AT1G70210 42.391 2.41e-60 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5227g00023 K18810 - gmx:100799323 350.517