Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5227g00014 ATGGACATATCCTCCAATGAACTCAGTGGAATAATTTCACCAGAGGTATCAAACATGAGAGCAATTATACTACTGAATTTGTCAAGAAACCAAATTTCAGGAAGCATCCCTACAACTATGGGTAGCTTGCAAACTTTGCAAAATCTATCTTTGGCTCACAACAATTTACAAGGACCTATACCTGAATCGCTTAGTGGCATGATAAGCATTGAGTCCATGGATCTTTCCCACAATTATTTATCTGGTGTGATTCCAAAGTCCTTAGAGTCATTACTCCATCTTAAATACATCAATCTTTCATATAATTTATTGCATGGAGAAATTCCAGAAGGTGGCCCTTTTCAAAATTTTACAGCTCAGTCTTTTATGATGAATAAAGATCTTTGTGGAAAATCCCAACTACAAGTCCAACCATGCAGAAAAGAAAGGAATTACATGACAAAAAAAGTGAAGTTGTTGATAAAATGCTCACTTCCTATCGTGGTTGTCATTCTGGTTGTTTCATGCATTGTCTTTCTAAGACGTAAGAGTGATGTGTATGCTAGTGGTTCAACGAACAATGATTTAATAAATGTGGGGATACCAATTAGGATATCCTATTATGATCTTTTGCATGGAACAAATAGATTTGATGAGAGTAATCTTCTTGGTGTTGGATATTATGGATCAGTATACAAAGCAACTCTTCCAAATGGAAAGGTCGTTGCGGTTAAAGTATTTCGCTCAAACTTGGATGAAGCATTAAGGAGTTTTGATATTGAGTGTACTGTAGTATGCAATTTACGACACCGCAACCTTGTTAAGGTTATTAGTAGTTGCTCAAATGATCATTTGAAGTGTCTAATAATGGAGTTCATGTCAAATGGGAGTCTTGACAAATGGTTATACTCTCATGACAACTATTTAGACATCCTACAAAGGTTGAGTATAATGATTGATGTGGCAGCTGCATTAGAATATCTTCATCATGGTTCTTCTACACCAGTTGTTCATTGTGATGTAAAACCGAGCAATGTCTTGTTAGATGAAAATATGGTGGCTCATCTTACTGATTTTGGTATAGCTAAATTGATGGGGGAAGAAGAGTTGGAAATTTATACAAAAACTTTGGCTACAATTGGTTACATGGCACCTGAGTATGGATCAAAAGGAGCTGTTTCCATTAAAGGAGATGTGTATAGCTATGGTGTTTTGTTAATGGAAATGCTTACAAGTAAAAAGCCAACAGATGATATGTTTGCTGAAAGTCTAAGTTTGAAAGATTGGGTTAGCACATCAACACCACATTCTGTTATCAATATTCTAGATCCAAATTTGCTGCACAATCAAAATATTGGTGATGTAGTACCACATATGTCATCAATTTTGGAGCTGGCTTTAAATTGTTGCACCAATATACCTGAGGCACGACCTACAATGATTGATGTTGTGGTATCGATGAAAAAAAGCAACTTTTCATTGATGCAAAATATTAGAGGCAACTCAAGGTAA 1491 0.3568 MDISSNELSGIISPEVSNMRAIILLNLSRNQISGSIPTTMGSLQTLQNLSLAHNNLQGPIPESLSGMISIESMDLSHNYLSGVIPKSLESLLHLKYINLSYNLLHGEIPEGGPFQNFTAQSFMMNKDLCGKSQLQVQPCRKERNYMTKKVKLLIKCSLPIVVVILVVSCIVFLRRKSDVYASGSTNNDLINVGIPIRISYYDLLHGTNRFDESNLLGVGYYGSVYKATLPNGKVVAVKVFRSNLDEALRSFDIECTVVCNLRHRNLVKVISSCSNDHLKCLIMEFMSNGSLDKWLYSHDNYLDILQRLSIMIDVAAALEYLHHGSSTPVVHCDVKPSNVLLDENMVAHLTDFGIAKLMGEEELEIYTKTLATIGYMAPEYGSKGAVSIKGDVYSYGVLLMEMLTSKKPTDDMFAESLSLKDWVSTSTPHSVINILDPNLLHNQNIGDVVPHMSSILELALNCCTNIPEARPTMIDVVVSMKKSNFSLMQNIRGNSR 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5227g00014 496 Gene3D Ribonuclease Inhibitor 1 147 IPR032675 -
Pral5227g00014 496 ProSitePatterns Serine/Threonine protein kinases active-site signature. 329 341 IPR008271 GO:0004672|GO:0006468
Pral5227g00014 496 Gene3D Transferase(Phosphotransferase) domain 1 286 492 - -
Pral5227g00014 496 Gene3D Phosphorylase Kinase; domain 1 195 285 - -
Pral5227g00014 496 ProSitePatterns Protein kinases ATP-binding region signature. 216 238 IPR017441 GO:0005524
Pral5227g00014 496 Pfam Protein kinase domain 211 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5227g00014 496 SUPERFAMILY Protein kinase-like (PK-like) 188 478 IPR011009 -
Pral5227g00014 496 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 24 138 - -
Pral5227g00014 496 SUPERFAMILY L domain-like 2 128 - -
Pral5227g00014 496 PANTHER OS04G0122200 PROTEIN 1 478 - -
Pral5227g00014 496 SMART serkin_6 210 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5227g00014 496 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 286 492 - -
Pral5227g00014 496 ProSiteProfiles Protein kinase domain profile. 210 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5227g00014 496 Pfam Leucine rich repeat 45 104 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5227g00014 Pral-Chr5227 124841 141939 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5227g00014 1 470 Receptor kinase-like Gene Family AT3G47570 38.124 6.65e-106 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral5227g00014 Pkinase 1.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5227g00014 - K13420 pcin:129285519 711.835