Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5226g00005 ATGGATGGCCAGAATTTAAGTCCCGTATCGCCTCCCCCTTTTCCTGGGTCGGCGTCGACGAGTTCCACATGCAAGAAAATGTTGATTACCAATTTAAAGCCTAGAAGGTGCAGCTATGTGTCCACAGCAACAAGAGATTTATGGGATCGTCTATTCGATGAAGGCTATAAAGCAGATGTTTGCATTAATACTCACAATGGTGGTATTCTCTTTGCTCATTCTAACGTTCTTGGGATGGCTTCTCCAGTATTGAGAGGCGTGCTTAAGCGTCAGCGATCAATCTCCATTCTTGGGGTTCCACATGATGTTGTCCGAGTTTTTATTAGATTCCTGTATTCTTCCTGCTACGAGAAAGAAGAAATGGAGGAATTGGTGTTGCCTTTGTTGGTGCTGTCACATGCATTTGTTGTACCTCACTTGAAGCGTGAATGTGAAGAGAAGCTAGAGATGAGTTTACTCACCATAGACAACGTAGTTGACGTATTTCAGCTTGCATTGCTATGTGATGCTCCACGGCTGAGCCTAATTTGTTACCGATTGATCTCAAAGAATCTCAAACTTGTTTCAGAGTCTGAAGGTTGGAGGGCAATGAAGCAGAGTCACCCATTTATGGAAACCGAAATTCTGCAGCATATGGCTGTGGAAGAAAATAGAAAGAGGATGAGGAAGAGGAAGAGTGAAGAAAGGAAGATGTATATGGAACTGTACGAGGCAATGGAGGCACTGGTTCACATCTGTAGAGATGGGTGTCGAACAATTGGTCCACACGATAAAGATTTAAAAGCAAACGAGGCTCCCTGTGGTTATGCAGCCTGCAAGGGGATAGAATTGCTTATTCGTCATTTTGTTGCTTGTAAATTAAGGGTCCCACGTGGTTGCATGCATTGTACGAGAATGTGGCAATTATTGCAGTTACATTCTCGACTCTGCGGCCATCCCCACACCTATAAAGAGCTTCAAGCAAAAATTATCGAATCAAAGAAAGAAAGATGGGATGAGGTGGAAAACATTGGTTCAAAAGATTTTGAGAACAAAGGGTATTGCCGTGGCGCCGATTTTTCAACAGCAATAGCCAAAAGTTCGAGGCGATGA 1092 0.4341 MDGQNLSPVSPPPFPGSASTSSTCKKMLITNLKPRRCSYVSTATRDLWDRLFDEGYKADVCINTHNGGILFAHSNVLGMASPVLRGVLKRQRSISILGVPHDVVRVFIRFLYSSCYEKEEMEELVLPLLVLSHAFVVPHLKRECEEKLEMSLLTIDNVVDVFQLALLCDAPRLSLICYRLISKNLKLVSESEGWRAMKQSHPFMETEILQHMAVEENRKRMRKRKSEERKMYMELYEAMEALVHICRDGCRTIGPHDKDLKANEAPCGYAACKGIELLIRHFVACKLRVPRGCMHCTRMWQLLQLHSRLCGHPHTYKELQAKIIESKKERWDEVENIGSKDFENKGYCRGADFSTAIAKSSRR 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5226g00005 363 ProSiteProfiles BTB domain profile. 58 120 IPR000210 GO:0005515
Pral5226g00005 363 Pfam BTB/POZ domain 50 150 IPR000210 GO:0005515
Pral5226g00005 363 SMART TAZ_2 229 314 IPR000197 -
Pral5226g00005 363 FunFam BTB/POZ and TAZ domain-containing protein 2 154 224 - -
Pral5226g00005 363 Gene3D Potassium Channel Kv1.1; Chain A 35 151 IPR011333 -
Pral5226g00005 363 MobiDBLite consensus disorder prediction 1 21 - -
Pral5226g00005 363 Gene3D - 153 224 - -
Pral5226g00005 363 Gene3D TAZ domain 225 336 IPR035898 -
Pral5226g00005 363 SMART BTB_4 58 152 IPR000210 GO:0005515
Pral5226g00005 363 SUPERFAMILY POZ domain 36 149 IPR011333 -
Pral5226g00005 363 Pfam TAZ zinc finger 236 311 IPR000197 -
Pral5226g00005 363 SUPERFAMILY TAZ domain 229 313 IPR035898 -
Pral5226g00005 363 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 25 315 IPR044513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5226g00005 Pral-Chr5226 16731 20785 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Pral5226g00005 BTB 2.2e-08 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5226g00005 - - qsa:O6P43_033903 428.713