Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5226g00004 ATGGCGACCTCTGCCTCTTCGTTTTCTTTCTCTAGCCTTTTGTGTGAAGAAGATGAAGCTAGCATTTTGAAGGTTGGTGATGAGAATTCTGGCATGGACTGGATGAACCCATGTTCTGTTTTCGAGGATGAAGAGGAGTACATTGAGATTTTGTTTAAAAGAGAAATGGGGTTTGCACCCCCAAGTGATGATTGCTCAACAAGTGCTGCTAAATGTCTCAAGAGTGCTCGTGTGGGTGCCATTGACTGGATTTTCAACACAGGGGCGAAATTTGGGTTTAAATCTCACACCATTTACTTATCAGTGACTTATTTCGATCAATTCCTTTCAAGGCGATCCATTGATGAAGCGAAAGATTGGGCCTTTCAATTATTATCGATGGCATGTTTATCTTTGGCAGCGAAAATGGAAGAGCAAAACGTACCAACTCTATCTGAATTACCGGGAAAAGAATATTGCTTTGAGAATAAAGTGATTAGGAAAATGGAATTACTAATTTTGGATTCCTTGGGATGGAAAATGGGATCCGTGACTCCTTTTGCATATCTGCGGTACTTGGTCAAGAAATTTTCCTTGGAATCCAAGCCAGAAGCAATAATCTCAAGAGCTGTAGGCCATATTATGGCAATCGTGAAAGATATTAGTTTAACAGATCATCGTCCATCTGTTATTGCTTCTGCTGCCATATTAGCAGCTTCTGACGCTACATTGACGAGACACAGTGTGGATCTTTGTTTAAGCTCGATATCCTGGGGGTCCCTAGAAAGTGAACTTGTATTTTCCTGTTACAATCTAATGCAGGAAATAGAGAGAAGGAAAATTAAGACTCCTGACTCAAATTTGTTGTCAACACATTCCAGCTTCACAGATGTTTTGGAGAATGCCTCTGTTCTTTCTTCTGGGACCAAGAGAAAACTCACTTTCCTAGAAAGCGGAACTGAAAGCTATCCTGAACAAAAGATACATCGACCTTAG 975 0.4062 MATSASSFSFSSLLCEEDEASILKVGDENSGMDWMNPCSVFEDEEEYIEILFKREMGFAPPSDDCSTSAAKCLKSARVGAIDWIFNTGAKFGFKSHTIYLSVTYFDQFLSRRSIDEAKDWAFQLLSMACLSLAAKMEEQNVPTLSELPGKEYCFENKVIRKMELLILDSLGWKMGSVTPFAYLRYLVKKFSLESKPEAIISRAVGHIMAIVKDISLTDHRPSVIASAAILAASDATLTRHSVDLCLSSISWGSLESELVFSCYNLMQEIERRKIKTPDSNLLSTHSSFTDVLENASVLSSGTKRKLTFLESGTESYPEQKIHRP 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5226g00004 324 SMART cyclin_7 82 168 IPR013763 -
Pral5226g00004 324 FunFam Cyclin-D5-1 72 175 - -
Pral5226g00004 324 CDD CYCLIN_AtCycD-like_rpt1 76 172 - -
Pral5226g00004 324 Gene3D - 50 247 - -
Pral5226g00004 324 SMART Cyclin_C_2 177 301 IPR004367 -
Pral5226g00004 324 SUPERFAMILY Cyclin-like 36 174 IPR036915 -
Pral5226g00004 324 PANTHER CYCLINS 42 275 IPR039361 -
Pral5226g00004 324 CDD CYCLIN_AtCycD-like_rpt2 177 266 - -
Pral5226g00004 324 Gene3D - 61 175 - -
Pral5226g00004 324 Pfam Cyclin, N-terminal domain 49 174 IPR006671 -
Pral5226g00004 324 Pfam Cyclin, C-terminal domain 177 274 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5226g00004 Pral-Chr5226 7042 9116 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5226g00004 9 251 Core Cell Cycle Gene Families AT4G37630 38.372 1.17e-46 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5226g00004 K18811 - gmx:100798140 351.673