Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5226g00002 ATGGAGACTTATTTACAAGAAAACTTTGAAGTGAAGTCCAAGAACTCATCTGAAGAGGTTCTTCAGAATTGGAGAAAACTCTGTGGGATTGTTAAGAATCCCAAAAGGAGGTTTCGCTTCACTGCTAATCTCTCCAAGCGAGGCGAAGCCGCTGCCATGCGTCGCACCAATCAGGAGAAATTGAGGGTTGCTGTTTTGGTTTCCAAAGCTGCATTTCAATTTATCCAAGGTGTGCAACCAAGTGATTACAAAGTACCTGAAGAAATTAGAGAAGCAGGCTTTCAGATCTGTGCGGATGAATTGGAGTCTATTGTTGAAAGACACGACATAAAGAAGCTAAAATATCATGGTGGGGTTGATGGTATCTCAGAAAAGCTTTCTACCTCAACCACTGATGGTATTAGCAATGACTCCGACCAACTTATCAAGAGACAAGAAATTTACGGAATCAACAAATTCATCGAGAGCGAAGCCCGTAGTTTCTGGGTTTTTGTTTTCGAAGCCCTTCAAGACATGACGCTAATGATCCTAGGCGTGTGTGCTCTTGTGTCTCTCGTCATTGGAATAGCGACAGAAGGATGGCCCAGAGGAGCTCACGATGGCCTAGGAATCGTCGTAAGTATCCTTCTGGTCGTGTTTGTGACAGCGACAAGTGATTATCGCCAATCATTACAGTTCAGGGATTTAGACAAGGAGAAAAAAAAGATTGCCATGCAGGTCACAAGAAATGGGTATAGGAAAAAAATGTCGATATATGATTTAGTTCCCGGCGACATTGTGCATCTTGCTATAGGAGATCAAGTCCCCACAGATGGACTCTTTGTTTCAGGATTCTCCGTGTTGATCGACGAGTCAAGTTTAACTGGAGAGAGCGAGCCAGTGATGGTGAATTCCCAGAATCCATTTCTTCTCTCTGGAACTAAGGTTCAAGATGGATCCTGCAAGATGTTGGTCACAACTGTAGGAATGAGAACTCAATGGGGTAAATTAATGGCTACATTGAGTGAAGGTGGAGACGATGAAACGCCATTGCAGGTGAAACTGAATGGAGTGGCCACTATCATAGGGAAGATAGGCCTATTCTTCGCGGTTCTTACTTTTGTAGTTTTGATGAAGGGACTTATGGCACGTCGACGACATGAAGGAAGATTTTGGACTGTGTCTGGGGACGACGCCATGGAGATGTTGGAATTCTTCGCCGTTGCAGTTACAATCGTTGTCGTTGCTGTCCCTGAAGGGTTGCCATTAGCTGTGACGCTGAGCCTTGCGTTTGCTATGAAGAAAATGATGAACGACAAAGCCCTTGTTCGACATTTGGCTGCCTGCGAGACCATGGGTTCAGCGACAAGTATATGTAGTGACAAGACAGGAACGTTGACGACCAACCGCATGACTGTCGTCAAAACATGCATTTGTATGAACATCAAGGAACTGACCAATGAGGAGAAGGATTCTTCTAGTTTTCGCTCTGAGTTACCAGATTTTGCTATGAAATTGTTACTAGAGTCGATATTTAATAATACTGGAGGAGAGGTTGTGACTAAAAGAAAAAGCAAAAGGAAACGTGAGATCCTGGGGACGCCTACAGAAGCTGCAATATTGGAGTATGGGCTGTCACAAGGTGGGGATTTTCAGAAAGAGAGAAAAGCATGTAAGATTGTGAAAGTTGAGCCATTCAACTCAGAAAAGAAAAGGATGGGTGTAGTTGTGGAGTTGCCTGAAGGAAATTTTCGAGCTCATTGTAAAGGTGCTTCTGAGATCGTTCTAGCTGCTTGTGACAAAGTGATCAATTCAAACGGAGAGGTCGTACCCCTTGATGCAGAGAAAAGTGATTATCTTAAAGAAACAATCCACTCATTTGCTTGTGAGGCACTTAGAACTCTATGCCTTGCCTATGTGGAATTGGAAAATGGGTTCTCTGCTGAAGATCCCATTCCTATTTCTGGATATACTTGTATAGGAATCATTGGTATCAAGGATCCTGTTCGTCCTGGTGTTAGGGAATCTGTTGCAATCTGTCGCTCAGCAGGAATAAGAGTAAGAATGGTCACAGGTGACAATATTAATACTGCAAAGGCTATAGCCAAAGAATGTGGGATTTTAACAGACGATGGCATAGCAATAGAAGGCCCAGATTTCAGAGAGAAGACTCAGGAGGAAATGTTTGAACTAATTCCCAAAATTCAGGTTATGGCCAGATCCTCACCACTAGATAAGCATACTTTAGTGAAACAACTGCGTACTACGTTTGGAGAAGTTGTGGCTGTAACTGGTGATGGAACGAACGACGCCCCTGCCCTTCATGAAGCAGACATTGGACTTGCAATGGGCATTGCTGGAACTGAGGTTGCTAAAGAAAGCGCTGATGTCATAATTCTGGATGATAATTTCTCTACTATAGTGACAGTGGCAAAATGGGGACGTTCAGTTTACATAAACATTCAAAAATTTGTCCAGTTTCAGCTGACAGTTAACGTGGTTGCCTTACTAGTGAACTTCAGTTCAGCATGCACAACAGGAAGTGCACCTCTTACGGCAGTTCAATTATTGTGGGTGAACATGATAATGGACACACTTGGAGCACTTGCCCTGGCAACTGAACCTCCAAACGACGAACTAATGAAACGTTCACCAGTGGGAAGGCGGGGAAGTTTCATCAGCAATGTTATGTGGAGGAATATCTTAGGCCAATCTCTATATCAAGTCCTAGTGATATGGATTCTCCAGGCCGAAGGGAAATGGATCTTTGGAATGAAGGGTCCAGATTCTGATATCTTGTTAAACACACTTATTTTCAACACATTTGTCTTCTGTCAGGTTTTCAACGAGATAAGCTCACGCGAGATGGAGGAAATAGATGTTTTTAAGGGCATATTGGATAATCATGTTTTCGTGGCTGTCATAAGTGTCACTGTTTTGTTTCAAATAATAATAGTTGAGTATTTAGGAACCTACGCTAACACCACACCCCTTGCTCCCATCTACTGGTTGTTTAGCGTTTCCATTGGATATTTAGGCATGCCCATTGCTGCTCACTTAAAGAAGATCCCTGTCTGA 3057 0.4311 METYLQENFEVKSKNSSEEVLQNWRKLCGIVKNPKRRFRFTANLSKRGEAAAMRRTNQEKLRVAVLVSKAAFQFIQGVQPSDYKVPEEIREAGFQICADELESIVERHDIKKLKYHGGVDGISEKLSTSTTDGISNDSDQLIKRQEIYGINKFIESEARSFWVFVFEALQDMTLMILGVCALVSLVIGIATEGWPRGAHDGLGIVVSILLVVFVTATSDYRQSLQFRDLDKEKKKIAMQVTRNGYRKKMSIYDLVPGDIVHLAIGDQVPTDGLFVSGFSVLIDESSLTGESEPVMVNSQNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVLTFVVLMKGLMARRRHEGRFWTVSGDDAMEMLEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNRMTVVKTCICMNIKELTNEEKDSSSFRSELPDFAMKLLLESIFNNTGGEVVTKRKSKRKREILGTPTEAAILEYGLSQGGDFQKERKACKIVKVEPFNSEKKRMGVVVELPEGNFRAHCKGASEIVLAACDKVINSNGEVVPLDAEKSDYLKETIHSFACEALRTLCLAYVELENGFSAEDPIPISGYTCIGIIGIKDPVRPGVRESVAICRSAGIRVRMVTGDNINTAKAIAKECGILTDDGIAIEGPDFREKTQEEMFELIPKIQVMARSSPLDKHTLVKQLRTTFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALLVNFSSACTTGSAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRSPVGRRGSFISNVMWRNILGQSLYQVLVIWILQAEGKWIFGMKGPDSDILLNTLIFNTFVFCQVFNEISSREMEEIDVFKGILDNHVFVAVISVTVLFQIIIVEYLGTYANTTPLAPIYWLFSVSIGYLGMPIAAHLKKIPV 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5226g00002 1018 CDD P-type_ATPase_Ca_PMCA-like 143 890 - -
Pral5226g00002 1018 PANTHER CATION TRANSPORTING ATPASE 65 1017 - -
Pral5226g00002 1018 Pfam E1-E2 ATPase 236 430 - -
Pral5226g00002 1018 NCBIfam HAD-IC family P-type ATPase 204 476 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5226g00002 1018 NCBIfam HAD-IC family P-type ATPase 727 837 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5226g00002 1018 NCBIfam HAD-IC family P-type ATPase 549 702 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5226g00002 1018 FunFam Calcium-transporting ATPase 650 802 - -
Pral5226g00002 1018 FunFam Calcium-transporting ATPase 774 1018 - -
Pral5226g00002 1018 SUPERFAMILY HAD-like 451 862 IPR036412 -
Pral5226g00002 1018 SFLD C1.7: P-type atpase like 434 809 - -
Pral5226g00002 1018 FunFam Calcium-transporting ATPase 215 335 - -
Pral5226g00002 1018 PRINTS P-type cation-transporting ATPase superfamily signature 676 686 - -
Pral5226g00002 1018 PRINTS P-type cation-transporting ATPase superfamily signature 452 466 - -
Pral5226g00002 1018 PRINTS P-type cation-transporting ATPase superfamily signature 654 665 - -
Pral5226g00002 1018 PRINTS P-type cation-transporting ATPase superfamily signature 757 776 - -
Pral5226g00002 1018 PRINTS P-type cation-transporting ATPase superfamily signature 781 793 - -
Pral5226g00002 1018 PRINTS P-type cation-transporting ATPase superfamily signature 283 297 - -
Pral5226g00002 1018 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 48 IPR024750 GO:0005516
Pral5226g00002 1018 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 458 666 IPR023299 GO:0000166
Pral5226g00002 1018 Gene3D - 138 335 - -
Pral5226g00002 1018 Gene3D - 167 1004 - -
Pral5226g00002 1018 Pfam Cation transporter/ATPase, N-terminus 115 184 IPR004014 -
Pral5226g00002 1018 SUPERFAMILY Calcium ATPase, transmembrane domain M 115 1017 IPR023298 -
Pral5226g00002 1018 PRINTS H+-transporting ATPase (proton pump) signature 613 631 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5226g00002 1018 PRINTS H+-transporting ATPase (proton pump) signature 757 773 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5226g00002 1018 PRINTS H+-transporting ATPase (proton pump) signature 789 814 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5226g00002 1018 SFLD p-type atpase 434 809 IPR044492 -
Pral5226g00002 1018 FunFam Calcium-transporting ATPase 16 76 - -
Pral5226g00002 1018 Pfam Cation transport ATPase (P-type) 514 595 - -
Pral5226g00002 1018 ProSitePatterns E1-E2 ATPases phosphorylation site. 454 460 IPR018303 -
Pral5226g00002 1018 SUPERFAMILY Calcium ATPase, transduction domain A 238 332 IPR008250 -
Pral5226g00002 1018 Pfam Cation transporting ATPase, C-terminus 842 1015 IPR006068 -
Pral5226g00002 1018 Gene3D - 16 76 - -
Pral5226g00002 1018 NCBIfam calcium-translocating P-type ATPase, PMCA-type 105 1018 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Pral5226g00002 1018 Gene3D - 449 802 IPR023214 -
Pral5226g00002 1018 Gene3D - 462 661 IPR023299 GO:0000166
Pral5226g00002 1018 FunFam Calcium-transporting ATPase 462 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5226g00002 Pral-Chr5226 1828 5702 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5226g00002 1 1018 Primary Pumps ATPases AT4G37640 80.373 0.0 1692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5226g00002 K01537 - gmx:100776926 1690.24